Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC007677.1-201ENST00000445757 515 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL5O76039 AC010655.1-201ENST00000449336 292 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.29□□□□□ -1.72
CDKL5O76039 RPS3AP50-201ENST00000487064 803 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL5O76039 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 AC093853.1-201ENST00000515689 483 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 SNORA40.12-201ENST00000516329 111 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC090572.1-201ENST00000519251 160 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL5O76039 AP000907.2-201ENST00000530827 353 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 AC024224.1-201ENST00000538284 609 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 AC125611.2-201ENST00000551907 647 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC018638.8-201ENST00000588755 281 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 RPL23AP92-201ENST00000603609 255 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC005034.5-201ENST00000604219 466 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 AL732372.2-225ENST00000642124 456 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL5O76039 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 RNU6-1243P-201ENST00000364028 107 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 Y_RNA.234-201ENST00000364409 97 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 SNORD81.2-201ENST00000365153 76 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 RNU6-108P-201ENST00000365558 107 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 AL356057.2-201ENST00000403318 432 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 MTHFD2P2-201ENST00000407725 247 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 RPS15AP12-201ENST00000419498 388 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 ELOCP4-201ENST00000420090 333 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL5O76039 RNU6-261P-201ENST00000459506 102 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 RPL9P32-201ENST00000464118 620 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 RNA5SP401-201ENST00000515920 127 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 SCARNA15.1-201ENST00000516384 125 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 Y_RNA.701-201ENST00000516812 110 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL5O76039 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL5O76039 AP003072.2-201ENST00000527756 676 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC008011.1-201ENST00000545989 227 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL5O76039 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL5O76039 VN1R85P-201ENST00000601587 426 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 RNU1-30P-201ENST00000606575 163 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AC064836.2-201ENST00000609491 462 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AC123768.4-201ENST00000616244 701 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 AC068831.8-201ENST00000620171 435 ntBASIC4.28□□□□□ -1.72
CDKL5O76039 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL5O76039 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL5O76039 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL5O76039 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
CDKL5O76039 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.27□□□□□ -1.73
CDKL5O76039 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL5O76039 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDKL5O76039 MIR1-2-201ENST00000384961 85 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL5O76039 AC012065.2-201ENST00000421295 375 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC006989.1-201ENST00000427212 131 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 PSMA6P3-201ENST00000428242 164 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
CDKL5O76039 GPR143P-201ENST00000434155 205 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL5O76039 AL049830.2-201ENST00000480072 201 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC055855.1-201ENST00000489563 579 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 MTCO3P9-201ENST00000506989 781 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 PCBP2P3-201ENST00000509726 843 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL5O76039 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.27□□□□□ -1.73
CDKL5O76039 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL5O76039 RNA5SP337-201ENST00000517007 109 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 OR5B19P-201ENST00000531766 928 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC093027.1-201ENST00000546698 429 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL5O76039 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.27□□□□□ -1.73
CDKL5O76039 DISC2.1-201ENST00000612827 205 ntBASIC4.27□□□□□ -1.73
CDKL5O76039 AL442067.2-201ENST00000614033 363 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms