Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.62□□□□□ -1.99
BRD4O60885 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 RPL23AP63-201ENST00000498752 471 ntBASIC2.62□□□□□ -1.99
BRD4O60885 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BRD4O60885 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 snoZ278.1-201ENST00000517059 112 ntBASIC2.62□□□□□ -1.99
BRD4O60885 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.62□□□□□ -1.99
BRD4O60885 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BRD4O60885 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.62□□□□□ -1.99
BRD4O60885 SNRPGP19-201ENST00000603826 189 ntBASIC2.62□□□□□ -1.99
BRD4O60885 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
BRD4O60885 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.62□□□□□ -1.99
BRD4O60885 AC009032.1-201ENST00000617574 431 ntBASIC2.62□□□□□ -1.99
BRD4O60885 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.62□□□□□ -1.99
BRD4O60885 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.62□□□□□ -1.99
BRD4O60885 AC104820.1-201ENST00000624183 307 ntBASIC2.62□□□□□ -1.99
BRD4O60885 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
BRD4O60885 HSPE1P11-201ENST00000339579 310 ntBASIC2.61□□□□□ -1.99
BRD4O60885 RNU6-457P-201ENST00000363999 107 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC083799.1-201ENST00000366451 910 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.61□□□□□ -1.99
BRD4O60885 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.61□□□□□ -1.99
BRD4O60885 IPO7P1-201ENST00000442031 636 ntBASIC2.61□□□□□ -1.99
BRD4O60885 SNORD13-201ENST00000459299 104 ntBASIC2.61□□□□□ -1.99
BRD4O60885 RPL31P41-201ENST00000477967 372 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.61□□□□□ -1.99
BRD4O60885 HMGB3P3-201ENST00000510526 400 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.61□□□□□ -1.99
BRD4O60885 COX6CP5-201ENST00000527162 228 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC079791.1-201ENST00000605356 973 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.61□□□□□ -1.99
BRD4O60885 MIR6840-201ENST00000611937 71 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC010678.1-201ENST00000614118 713 ntBASIC2.61□□□□□ -1.99
BRD4O60885 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BRD4O60885 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
BRD4O60885 SNORA25.9-201ENST00000365087 128 ntBASIC2.61□□□□□ -1.99
BRD4O60885 SNORA40.18-201ENST00000391200 128 ntBASIC2.61□□□□□ -1.99
BRD4O60885 RNU6-712P-201ENST00000410558 100 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AL513331.1-201ENST00000411908 397 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.61□□□□□ -1.99
BRD4O60885 ARPC3P1-201ENST00000437218 533 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC004022.1-201ENST00000447766 1066 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 AL163540.1-201ENST00000485382 386 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC007182.2-201ENST00000489251 402 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC008427.1-201ENST00000503102 655 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 BTF3P12-201ENST00000519620 469 ntBASIC2.61□□□□□ -1.99
BRD4O60885 HMGN1P28-201ENST00000521340 364 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 TRAV28-201ENST00000557548 323 ntBASIC2.61□□□□□ -1.99
BRD4O60885 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.61□□□□□ -1.99
BRD4O60885 RPS15AP11-201ENST00000594193 385 ntBASIC2.61□□□□□ -1.99
BRD4O60885 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.61□□□□□ -1.99
BRD4O60885 DUXAP9-208ENST00000622815 614 ntBASIC2.61□□□□□ -1.99
BRD4O60885 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
BRD4O60885 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
BRD4O60885 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BRD4O60885 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BRD4O60885 AL022578.1-201ENST00000439330 1433 ntBASIC2.61□□□□□ -1.99
BRD4O60885 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRD4O60885 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRD4O60885 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRD4O60885 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.6□□□□□ -1.99
BRD4O60885 CR848007.1-201ENST00000442354 1699 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC004520.1-201ENST00000608362 1413 ntBASIC2.6□□□□□ -1.99
BRD4O60885 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRD4O60885 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.6□□□□□ -1.99
BRD4O60885 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
BRD4O60885 MIR489-201ENST00000384923 84 ntBASIC2.6□□□□□ -1.99
BRD4O60885 MIR9-3-201ENST00000385084 90 ntBASIC2.6□□□□□ -1.99
BRD4O60885 RPL17P12-201ENST00000413391 526 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AL445685.2-201ENST00000422551 342 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AL590623.1-201ENST00000427864 105 ntBASIC2.6□□□□□ -1.99
BRD4O60885 MTND2P21-201ENST00000436242 1042 ntBASIC2.6□□□□□ -1.99
BRD4O60885 NDUFA5P4-201ENST00000436704 385 ntBASIC2.6□□□□□ -1.99
BRD4O60885 UBE2V1P5-201ENST00000440070 405 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC114878.1-201ENST00000441166 358 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC245517.4-201ENST00000448601 281 ntBASIC2.6□□□□□ -1.99
BRD4O60885 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.6□□□□□ -1.99
BRD4O60885 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.6□□□□□ -1.99
BRD4O60885 RPS27P26-201ENST00000494583 239 ntBASIC2.6□□□□□ -1.99
BRD4O60885 KLRA1P-201ENST00000503499 986 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC011352.3-201ENST00000505162 593 ntBASIC2.6□□□□□ -1.99
BRD4O60885 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.6□□□□□ -1.99
BRD4O60885 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.6□□□□□ -1.99
BRD4O60885 HMGB1P46-201ENST00000520062 610 ntBASIC2.6□□□□□ -1.99
BRD4O60885 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
BRD4O60885 AC012414.2-201ENST00000559474 187 ntBASIC2.6□□□□□ -1.99
BRD4O60885 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
BRD4O60885 AC009127.3-201ENST00000570531 403 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms