Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 DHX9P1-201ENST00000436565 3076 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 Y_RNA.128-201ENST00000363391 112 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 RNU6-1284P-201ENST00000363701 100 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 Y_RNA.259-201ENST00000364619 101 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 SNORD42.2-201ENST00000365570 69 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 RNU6-821P-201ENST00000390995 107 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AL592114.1-201ENST00000403842 483 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 RPS20P14-201ENST00000412545 360 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 MTCO2P27-201ENST00000420740 428 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 MTND3P2-201ENST00000438452 342 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 Y_RNA.639-201ENST00000458981 102 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.18□□□□□ -1.58
GRIN3BO60391 HMGB1P25-201ENST00000468402 607 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.18□□□□□ -1.58
GRIN3BO60391 Y_RNA.654-201ENST00000497848 106 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.18□□□□□ -1.58
GRIN3BO60391 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.18□□□□□ -1.58
GRIN3BO60391 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 RNU6-1092P-201ENST00000516955 87 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 RNU6-264P-201ENST00000517134 104 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 FTH1P11-201ENST00000517577 551 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 HMGN1P28-201ENST00000521340 364 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 MTND4P7-201ENST00000523876 130 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC009852.2-201ENST00000567898 485 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.18□□□□□ -1.58
GRIN3BO60391 POLR3GP2-201ENST00000588366 668 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC103710.3-201ENST00000608157 948 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 uc_338.15-201ENST00000615470 191 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AC025034.2-201ENST00000623264 286 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AL596275.2-204ENST00000641628 552 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AL596275.2-206ENST00000641957 626 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.18□□□□□ -1.58
GRIN3BO60391 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 EXOC5P1-201ENST00000510543 1969 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
GRIN3BO60391 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GRIN3BO60391 MTCO1P9-201ENST00000505577 1534 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 AP001350.1-201ENST00000601906 1524 ntBASIC5.18□□□□□ -1.58
GRIN3BO60391 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 AC107068.1-201ENST00000563286 4218 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 Z95331.1-201ENST00000623075 23112 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 Y_RNA.167-201ENST00000363735 109 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RNU6-82P-201ENST00000363970 107 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 SNORD115-7-201ENST00000365306 82 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RNU6-61P-201ENST00000365528 109 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 RNU6-637P-201ENST00000384050 107 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RNU6-1297P-201ENST00000384415 104 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 MT-TC-201ENST00000387405 66 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 SNORA75.4-201ENST00000391278 119 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 MIR548P-201ENST00000408336 84 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RNU6-387P-201ENST00000411331 105 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.17□□□□□ -1.58
GRIN3BO60391 BEND7P1-201ENST00000422058 457 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 NUP35P1-201ENST00000422734 947 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AC018630.2-202ENST00000422992 927 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AL591212.2-201ENST00000433923 257 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 BRK1P2-201ENST00000442875 223 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.17□□□□□ -1.58
GRIN3BO60391 AL162395.1-201ENST00000457882 422 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AP001486.1-201ENST00000463339 476 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RPL35AP15-201ENST00000468042 339 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 RPS26P28-201ENST00000470806 348 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 MYL12AP1-201ENST00000518490 515 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AP001804.3-201ENST00000525146 880 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 DEFB108D-201ENST00000527787 222 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AL137161.1-201ENST00000532231 390 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.17□□□□□ -1.58
GRIN3BO60391 AL118558.2-201ENST00000556294 238 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.17□□□□□ -1.58
GRIN3BO60391 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.17□□□□□ -1.58
GRIN3BO60391 AC092807.2-201ENST00000609367 243 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 AL390240.1-201ENST00000612950 384 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.17□□□□□ -1.58
GRIN3BO60391 MIR3651-201ENST00000630427 90 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 AC055839.1-201ENST00000634467 498 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GRIN3BO60391 MTND5P3-201ENST00000438536 1800 ntBASIC5.17□□□□□ -1.58
GRIN3BO60391 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms