Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.56□□□□□ -2
CHMP2AO43633 AP001521.1-201ENST00000609150 300 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC107294.1-201ENST00000609524 467 ntBASIC2.56□□□□□ -2
CHMP2AO43633 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
CHMP2AO43633 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHMP2AO43633 AC034102.8-201ENST00000615146 484 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2AO43633 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
CHMP2AO43633 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
CHMP2AO43633 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP2AO43633 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
CHMP2AO43633 RNU5B-4P-201ENST00000363508 111 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RNU1-73P-201ENST00000383971 164 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RNU6-1035P-201ENST00000384477 107 ntBASIC2.55□□□□□ -2
CHMP2AO43633 MIR221-201ENST00000385135 110 ntBASIC2.55□□□□□ -2
CHMP2AO43633 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP2AO43633 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.55□□□□□ -2
CHMP2AO43633 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.55□□□□□ -2
CHMP2AO43633 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.55□□□□□ -2
CHMP2AO43633 TAAR7P-201ENST00000436141 242 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AP000949.1-201ENST00000438328 629 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AL022578.1-201ENST00000439330 1433 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2AO43633 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHMP2AO43633 RPS15AP27-201ENST00000449183 343 ntBASIC2.55□□□□□ -2
CHMP2AO43633 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHMP2AO43633 AL353691.1-201ENST00000451332 387 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AC027673.1-201ENST00000456245 405 ntBASIC2.55□□□□□ -2
CHMP2AO43633 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2AO43633 RN7SL429P-201ENST00000479090 223 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RN7SL489P-201ENST00000486185 223 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RN7SL327P-201ENST00000488659 223 ntBASIC2.55□□□□□ -2
CHMP2AO43633 EIF4EP3-201ENST00000498782 656 ntBASIC2.55□□□□□ -2
CHMP2AO43633 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.55□□□□□ -2
CHMP2AO43633 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2AO43633 snoZ278.1-201ENST00000517059 112 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AP003467.2-201ENST00000520175 319 ntBASIC2.55□□□□□ -2
CHMP2AO43633 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.55□□□□□ -2
CHMP2AO43633 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.55□□□□□ -2
CHMP2AO43633 AP002770.2-201ENST00000543613 532 ntBASIC2.55□□□□□ -2
CHMP2AO43633 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP2AO43633 MTCYBP27-201ENST00000555160 670 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AC009163.5-201ENST00000575421 637 ntBASIC2.55□□□□□ -2
CHMP2AO43633 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.55□□□□□ -2
CHMP2AO43633 DUXAP11-201ENST00000603858 526 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AC099785.1-201ENST00000605697 437 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AL583856.2-201ENST00000606298 543 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AC004852.3-201ENST00000614131 326 ntBASIC2.55□□□□□ -2
CHMP2AO43633 RN7SL853P-201ENST00000617250 223 ntBASIC2.55□□□□□ -2
CHMP2AO43633 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
CHMP2AO43633 MIR6766-201ENST00000622641 72 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AC005858.4-201ENST00000623191 700 ntBASIC2.55□□□□□ -2
CHMP2AO43633 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2AO43633 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CHMP2AO43633 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP2AO43633 ZNF658B-202ENST00000615961 3375 ntBASIC2.54□□□□□ -2
CHMP2AO43633 CR848007.1-201ENST00000442354 1699 ntBASIC2.54□□□□□ -2
CHMP2AO43633 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP2AO43633 RNU6-1066P-201ENST00000363573 105 ntBASIC2.54□□□□□ -2
CHMP2AO43633 RNU6-549P-201ENST00000384433 107 ntBASIC2.54□□□□□ -2
CHMP2AO43633 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
CHMP2AO43633 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
CHMP2AO43633 MIR1290-201ENST00000408735 78 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC019178.2-201ENST00000423595 505 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC092634.2-201ENST00000428146 1010 ntBASIC2.54□□□□□ -2
CHMP2AO43633 MRPL42P4-201ENST00000453267 443 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC087588.1-201ENST00000462203 316 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
CHMP2AO43633 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.54□□□□□ -2
CHMP2AO43633 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.54□□□□□ -2
CHMP2AO43633 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
CHMP2AO43633 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.54□□□□□ -2
CHMP2AO43633 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.54□□□□□ -2
CHMP2AO43633 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
CHMP2AO43633 DUXAP3-201ENST00000603616 594 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.54□□□□□ -2
CHMP2AO43633 AL450472.3-201ENST00000615578 367 ntBASIC2.54□□□□□ -2
CHMP2AO43633 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.54□□□□□ -2
CHMP2AO43633 MIR6873-201ENST00000622788 63 ntBASIC2.54□□□□□ -2
CHMP2AO43633 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.54□□□□□ -2
CHMP2AO43633 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
CHMP2AO43633 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.54□□□□□ -2
CHMP2AO43633 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.54□□□□□ -2
CHMP2AO43633 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CHMP2AO43633 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHMP2AO43633 SDAD1P2-201ENST00000441308 2028 ntBASIC2.53□□□□□ -2
CHMP2AO43633 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
CHMP2AO43633 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.53□□□□□ -2
CHMP2AO43633 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AC007742.1-201ENST00000425789 329 ntBASIC2.53□□□□□ -2
CHMP2AO43633 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.53□□□□□ -2
CHMP2AO43633 GTF2IP20-201ENST00000431663 360 ntBASIC2.53□□□□□ -2
CHMP2AO43633 ELOCP26-201ENST00000436067 329 ntBASIC2.53□□□□□ -2
CHMP2AO43633 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.53□□□□□ -2
CHMP2AO43633 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.53□□□□□ -2
CHMP2AO43633 MTCYBP17-201ENST00000503579 789 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms