Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL359757.2-201ENST00000624309 274 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SRGAP3O43295 ELL2P4-201ENST00000446870 1376 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRGAP3O43295 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SRGAP3O43295 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 Y_RNA.22-201ENST00000362492 102 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 RNA5SP258-201ENST00000362750 119 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 RNU6-552P-201ENST00000362869 119 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 Y_RNA.126-201ENST00000363382 111 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 RNA5SP391-201ENST00000363456 119 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 MIR454-201ENST00000390180 115 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 RNY4P36-201ENST00000391116 96 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC009965.2-201ENST00000425328 970 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 AL031736.2-201ENST00000426573 787 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 MTCO1P29-201ENST00000496868 288 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 FAM206BP-201ENST00000510179 541 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 RNU6-352P-201ENST00000516908 107 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 SETP2-201ENST00000553886 926 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 DNAJC8P1-201ENST00000554535 372 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC106785.1-201ENST00000565935 262 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC005255.1-201ENST00000593748 216 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 RMST_9.1-201ENST00000619945 193 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.87□□□□□ -1.63
SRGAP3O43295 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
SRGAP3O43295 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AC009313.2-201ENST00000417893 1941 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SRGAP3O43295 AP001350.1-201ENST00000601906 1524 ntBASIC4.87□□□□□ -1.63
SRGAP3O43295 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.86□□□□□ -1.63
SRGAP3O43295 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SRGAP3O43295 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU5A-8P-201ENST00000364102 114 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU6-641P-201ENST00000384006 107 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU6-639P-201ENST00000384074 107 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU6-38P-201ENST00000384085 107 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU4-14P-201ENST00000410858 122 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 RNA5SP306-201ENST00000411087 107 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.86□□□□□ -1.63
SRGAP3O43295 RPS12P5-201ENST00000423449 371 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 HMGB3P11-201ENST00000440127 604 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 RNU6-333P-201ENST00000459117 107 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC012181.1-201ENST00000479895 423 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC020893.1-201ENST00000502452 580 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC021146.2-201ENST00000504736 556 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.86□□□□□ -1.63
SRGAP3O43295 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 RN7SKP219-201ENST00000516825 296 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.86□□□□□ -1.63
SRGAP3O43295 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.86□□□□□ -1.63
SRGAP3O43295 DPPA3P3-201ENST00000603842 430 ntBASIC4.86□□□□□ -1.63
SRGAP3O43295 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.86□□□□□ -1.63
SRGAP3O43295 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.86□□□□□ -1.63
SRGAP3O43295 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.86□□□□□ -1.63
SRGAP3O43295 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SRGAP3O43295 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SRGAP3O43295 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 AC009902.3-201ENST00000606235 2172 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC004972.1-201ENST00000623934 2209 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SRGAP3O43295 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.85□□□□□ -1.63
SRGAP3O43295 Y_RNA.146-201ENST00000363549 102 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 MTCYBP4-201ENST00000401524 249 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 SSXP10-201ENST00000402595 565 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.85□□□□□ -1.63
SRGAP3O43295 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RPL7P2-201ENST00000427639 268 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC011742.1-201ENST00000431448 434 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms