Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 FTH1P15-201ENST00000406984 280 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 RNA5SP338-201ENST00000410495 85 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 MUPP-201ENST00000438111 566 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 AC008571.1-201ENST00000467232 300 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 SNORA48.9-201ENST00000516419 162 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 U73023.1-201ENST00000603134 700 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.34□□□□□ -2.19
CACNA1AO00555 AC092954.1-201ENST00000609121 445 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 AC090517.3-201ENST00000625170 141 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 U6.98-201ENST00000637157 84 ntBASIC1.34□□□□□ -2.19
CACNA1AO00555 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.34□□□□□ -2.19
CACNA1AO00555 RNY4P24-201ENST00000362735 96 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 RNA5SP181-201ENST00000410246 98 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 RPL21P24-201ENST00000413752 448 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 AC093801.2-201ENST00000503966 1050 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.34□□□□□ -2.2
CACNA1AO00555 AC067852.7-201ENST00000623270 535 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
CACNA1AO00555 OR5H6-203ENST00000642105 978 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 AC092447.7-201ENST00000422212 1621 ntBASIC1.34□□□□□ -2.2
CACNA1AO00555 AP000560.1-201ENST00000624150 1937 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 Y_RNA.18-201ENST00000362461 102 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 HMGN1P10-201ENST00000474557 553 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 RPL23AP44-201ENST00000482216 473 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1AO00555 TBCAP3-201ENST00000512475 312 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1AO00555 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1AO00555 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1AO00555 AC068620.3-201ENST00000602749 560 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AL442644.1-201ENST00000454390 3105 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1AO00555 AC138915.1-201ENST00000565427 1685 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 RPL34P26-201ENST00000445636 354 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AP000705.1-201ENST00000454567 350 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC104435.1-201ENST00000483483 166 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC084851.1-201ENST00000529105 249 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.33□□□□□ -2.2
CACNA1AO00555 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 AL445493.3-201ENST00000619568 477 ntBASIC1.33□□□□□ -2.2
CACNA1AO00555 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1AO00555 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
CACNA1AO00555 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 RNU6-1064P-201ENST00000410626 104 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.32□□□□□ -2.2
CACNA1AO00555 AL021397.1-201ENST00000451806 248 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1AO00555 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1AO00555 RPL23AP62-201ENST00000463396 453 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 IGLVI-20-201ENST00000519296 130 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.32□□□□□ -2.2
CACNA1AO00555 MTRNR2L2-201ENST00000604882 87 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.32□□□□□ -2.2
CACNA1AO00555 SNORA62.2-201ENST00000364672 152 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1AO00555 RPL23AP7-203ENST00000449021 469 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.32□□□□□ -2.2
CACNA1AO00555 AC104986.1-201ENST00000517978 436 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1AO00555 Y_RNA.804-201ENST00000615262 101 ntBASIC1.32□□□□□ -2.2
CACNA1AO00555 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1AO00555 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1AO00555 RNA5SP212-201ENST00000391223 107 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 FNDC3CP-201ENST00000420795 1155 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.31□□□□□ -2.2
CACNA1AO00555 ARL2BPP4-201ENST00000506854 471 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 KATNBL1P1-201ENST00000605192 748 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AC107294.3-201ENST00000609211 526 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AP001005.3-201ENST00000622049 129 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AL031663.1-201ENST00000437445 219 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1AO00555 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1AO00555 MTND5P21-201ENST00000531961 522 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 SYF2P1-201ENST00000550658 413 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 CYCSP2-201ENST00000558168 301 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 AC233266.2-201ENST00000567067 528 ntBASIC1.31□□□□□ -2.2
CACNA1AO00555 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1AO00555 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.3□□□□□ -2.2
CACNA1AO00555 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1AO00555 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CACNA1AO00555 U8.1-201ENST00000362843 134 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.3□□□□□ -2.2
CACNA1AO00555 RPS27P5-201ENST00000444247 244 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CACNA1AO00555 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1AO00555 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.3□□□□□ -2.2
CACNA1AO00555 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1AO00555 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CACNA1AO00555 AP006248.3-201ENST00000623580 594 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 RNA5SP344-201ENST00000411081 104 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.3□□□□□ -2.2
CACNA1AO00555 CR848007.2-201ENST00000424918 787 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 RWDD4P2-201ENST00000426392 563 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 MTCYBP45-201ENST00000435243 565 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 HMGN1P8-201ENST00000463578 288 ntBASIC1.3□□□□□ -2.2
CACNA1AO00555 RWDD4P1-201ENST00000488019 565 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms