Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC093767.1-201ENST00000504523 156 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC034244.1-201ENST00000507687 207 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC010587.2-201ENST00000511727 448 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC008413.1-201ENST00000511864 177 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 DNAJC8P1-201ENST00000554535 372 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC107954.1-201ENST00000565906 727 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 MIR4637-201ENST00000582405 84 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 VN1R78P-201ENST00000597393 564 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AP002907.1-201ENST00000606361 1430 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 CR381653.2-201ENST00000624041 768 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC079228.1-201ENST00000624774 1049 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 NUP58P1-201ENST00000502546 1738 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC138915.1-201ENST00000565427 1685 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 FAM133CP-201ENST00000332869 704 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 SNORD82-201ENST00000365530 70 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 Y_RNA.493-201ENST00000384422 102 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 MIR592-201ENST00000384959 97 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 HMGB1P17-201ENST00000403495 628 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 VPS26BP1-201ENST00000417155 755 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL139421.1-201ENST00000423010 169 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 TXNL1P1-201ENST00000429528 554 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 SNRPEP4-201ENST00000435815 279 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC129850.1-201ENST00000436203 508 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC092427.1-201ENST00000439177 601 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 MTND3P1-201ENST00000441336 220 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL513124.1-201ENST00000450410 614 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC026410.2-201ENST00000460281 156 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC104472.2-201ENST00000469035 601 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 RPL7P18-201ENST00000478965 734 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 RPL23AP55-201ENST00000498163 452 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 HMGB1P22-201ENST00000505315 124 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC109445.1-201ENST00000512356 383 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 HSPA8P13-201ENST00000523715 472 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 DEFB131D-201ENST00000526803 184 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL512310.1-201ENST00000548639 172 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC008127.2-201ENST00000549925 1075 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL391156.1-201ENST00000554965 554 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 CYCSP2-201ENST00000558168 301 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC009094.1-201ENST00000564443 426 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AL009028.1-201ENST00000604895 802 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC025588.4-201ENST00000615802 908 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 AC068831.7-201ENST00000616954 363 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 CYP3A51P-201ENST00000633513 256 ntBASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TMX2-CTNND1H3BSU7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 AL391994.1-201ENST00000254724 282 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 Y_RNA.548-201ENST00000384656 105 ntBASIC2.53□□□□□ -2
TMX2-CTNND1H3BSU7 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms