Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AP000403.1-201ENST00000603349 851 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC024220.1-201ENST00000603675 484 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC012468.1-201ENST00000604888 430 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RNU4-5P-201ENST00000607255 135 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 SNHG22-203ENST00000617833 660 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC097655.1-201ENST00000635075 318 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AL034408.1-202ENST00000636088 415 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 AC099654.9-201ENST00000637055 678 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMKR1H3BMG3 MTND5P29-201ENST00000458676 1807 ntBASIC2.12□□□□□ -2.07
SMKR1H3BMG3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 RNA5SP50-201ENST00000363731 107 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 SNORA56-201ENST00000383966 129 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 MIR19A-201ENST00000384878 82 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL807761.1-201ENST00000417622 171 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC092648.1-201ENST00000425870 423 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 HMGB1P9-201ENST00000429856 646 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL035246.1-201ENST00000433554 1255 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 USP9YP24-201ENST00000434374 697 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 RPL36AP6-201ENST00000435770 321 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC098831.1-201ENST00000440661 216 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 MTND3P1-201ENST00000441336 220 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 MTATP6P30-201ENST00000443540 664 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 FAM103A2P-201ENST00000444122 354 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 USP9YP17-201ENST00000444617 696 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC104389.3-201ENST00000445629 235 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 MRPL50P4-201ENST00000446432 475 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 PTENP1-201ENST00000447117 1215 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 RNU7-59P-201ENST00000459101 61 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 RN7SL863P-201ENST00000462370 296 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 RPS27AP10-201ENST00000496103 208 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 NACAP3-201ENST00000552100 481 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC091057.3-201ENST00000602684 733 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC021171.1-201ENST00000603137 706 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC007038.2-201ENST00000608095 740 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC097478.2-201ENST00000610572 514 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL136981.2-201ENST00000617319 734 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AL355493.4-201ENST00000618530 292 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 Z99129.2-201ENST00000619967 314 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 U2.21-201ENST00000637295 81 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC110491.1-201ENST00000562191 2010 ntBASIC2.11□□□□□ -2.07
SMKR1H3BMG3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMKR1H3BMG3 AC010329.5-201ENST00000623497 2174 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MIR22-201ENST00000362190 85 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RNU6-778P-201ENST00000363269 103 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 SNORA4.1-201ENST00000364263 144 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RNU6-636P-201ENST00000384598 107 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MIR490-201ENST00000384865 128 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MIR512-1-201ENST00000384913 84 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 U3.26-201ENST00000391236 204 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MIR1305-201ENST00000408300 86 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 SKA2P1-201ENST00000425592 390 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC010153.1-201ENST00000432862 727 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AL117351.1-201ENST00000438864 766 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms