Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 SNORA16.1-201ENST00000364597 132 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 CST2P1-201ENST00000425770 87 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 RNU6-711P-201ENST00000517255 106 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AC139103.1-201ENST00000534696 1030 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 SNORD84-203ENST00000584275 78 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AC098657.3-201ENST00000620434 263 ntBASIC1.34□□□□□ -2.19
CNOT1A5YKK6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.34□□□□□ -2.19
CNOT1A5YKK6 AC073055.1-201ENST00000456901 1621 ntBASIC1.34□□□□□ -2.2
CNOT1A5YKK6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.2
CNOT1A5YKK6 AL589994.1-201ENST00000404962 340 ntBASIC1.34□□□□□ -2.2
CNOT1A5YKK6 RPL17P12-201ENST00000413391 526 ntBASIC1.34□□□□□ -2.2
CNOT1A5YKK6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 OR4K8P-201ENST00000578842 1048 ntBASIC1.34□□□□□ -2.2
CNOT1A5YKK6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.34□□□□□ -2.2
CNOT1A5YKK6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 HMGN2P21-201ENST00000447764 270 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 OR51B8P-201ENST00000449892 769 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 HSPE1P20-201ENST00000538133 289 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 SNRPGP15-201ENST00000600149 222 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 DUXAP4-201ENST00000603046 613 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC112191.3-201ENST00000604371 277 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AP000676.4-201ENST00000624659 623 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 Z85994.2-201ENST00000434327 452 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC146507.1-201ENST00000468335 354 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 RPL21P131-201ENST00000497298 483 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.33□□□□□ -2.2
CNOT1A5YKK6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 HMGB1P5-201ENST00000255320 642 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 RNU6-50P-201ENST00000362356 103 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AL591034.1-201ENST00000407447 340 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AL357078.2-201ENST00000416486 427 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 HMGN1P8-201ENST00000463578 288 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 RPL21P104-201ENST00000464143 478 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 RPL37P6-202ENST00000464216 403 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 SNORA7.2-201ENST00000364446 145 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC096533.1-201ENST00000411645 353 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AL591212.2-201ENST00000433923 257 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 RPL37P25-201ENST00000507308 276 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC010625.1-201ENST00000511296 403 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 RNA5SP330-201ENST00000517096 96 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.32□□□□□ -2.2
CNOT1A5YKK6 SUB1P4-201ENST00000566062 339 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.32□□□□□ -2.2
CNOT1A5YKK6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 MIR373-201ENST00000362273 69 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 Y_RNA.60-201ENST00000362831 98 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 RNA5SP393-201ENST00000363423 117 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 MIR144-201ENST00000384886 86 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 RPS15AP7-201ENST00000439294 405 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 OR6C73P-201ENST00000546432 358 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 MIR3935-201ENST00000583472 104 ntBASIC1.31□□□□□ -2.2
CNOT1A5YKK6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CNOT1A5YKK6 CD24P4-201ENST00000382840 243 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.3□□□□□ -2.2
CNOT1A5YKK6 MTCYBP12-201ENST00000440559 1134 ntBASIC1.3□□□□□ -2.2
CNOT1A5YKK6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms