Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC092325.1-201ENST00000566449 554 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MIR5685-201ENST00000579080 79 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC098848.2-201ENST00000588023 330 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AP002360.4-201ENST00000606980 481 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 BX323046.1-201ENST00000610145 535 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 SNHG22-203ENST00000617833 660 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC139792.3-201ENST00000623525 224 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.22-201ENST00000362492 102 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.256-201ENST00000364594 104 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 SNORA23-201ENST00000365128 182 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 RNU5E-6P-201ENST00000365574 115 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.402-201ENST00000383972 102 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.409-201ENST00000383990 98 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 MIR708-201ENST00000390708 88 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-780P-201ENST00000391030 104 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 SNORD115-47-201ENST00000391226 86 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AL603766.1-201ENST00000407763 664 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 MIR1277-201ENST00000408536 78 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 RPL23AP30-201ENST00000432419 501 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 GAPDHP27-201ENST00000447427 1020 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC008481.1-201ENST00000463278 396 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC007537.2-201ENST00000472093 511 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 CEACAMP10-202ENST00000495431 496 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 HSPD1P15-201ENST00000505573 1122 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 KLHL2P1-201ENST00000508691 521 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC110768.1-201ENST00000509222 400 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 SNORD27.1-201ENST00000516319 72 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 RNU7-51P-201ENST00000516560 62 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC104383.1-201ENST00000530297 370 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC109635.4-202ENST00000531666 412 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AL512360.1-201ENST00000555346 234 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 TGIF1P1-201ENST00000558095 802 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC025678.1-201ENST00000567861 338 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC136624.4-201ENST00000573044 370 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC067852.3-201ENST00000589177 561 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC025449.1-201ENST00000603896 529 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC012443.1-201ENST00000605605 231 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AL136295.6-201ENST00000610486 658 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC004696.1-201ENST00000614345 607 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 U4.6-201ENST00000621618 127 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AL360181.4-201ENST00000621752 134 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC112200.1-201ENST00000625015 234 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 MIR1321-201ENST00000637766 79 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 AC093536.2-201ENST00000565257 1406 ntBASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.6□□□□□ -1.83
TCRBV7S3A2A0A539 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 FRG1CP-201ENST00000358464 769 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RNA5SP515-201ENST00000364570 118 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1181P-201ENST00000384191 106 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC110754.1-201ENST00000399740 601 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AL359634.1-202ENST00000404721 284 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RNU2-36P-201ENST00000410361 191 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC016769.2-201ENST00000414815 475 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AL139415.2-201ENST00000431968 163 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RPS20P5-201ENST00000434808 360 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RPS15AP9-201ENST00000439856 381 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 MTCO2P3-201ENST00000442543 421 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 SNRPGP6-201ENST00000451124 220 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 S100A11P1-201ENST00000477525 312 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 UBE2CP3-201ENST00000502715 450 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC105914.1-201ENST00000511798 226 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 RANP9-201ENST00000519957 271 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms