Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU1-108P-201ENST00000362556 161 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP175-201ENST00000364275 119 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.263-201ENST00000364659 114 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP189-201ENST00000364920 115 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORD81.2-201ENST00000365153 76 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.356-201ENST00000365475 113 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP151-201ENST00000365632 117 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU1-44P-201ENST00000384453 163 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA11F-201ENST00000408237 128 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPS12P24-201ENST00000412619 387 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL23AP26-201ENST00000412728 464 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL139095.3-201ENST00000419672 1203 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL645937.1-202ENST00000421799 937 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL132765.1-201ENST00000434165 553 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL35AP15-201ENST00000468042 339 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC010618.1-201ENST00000469924 477 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 UQCRHP4-201ENST00000471686 272 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL31P13-201ENST00000484151 370 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 MTND3P22-201ENST00000510932 243 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC112206.3-201ENST00000514578 389 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-927P-201ENST00000516199 100 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-1256P-201ENST00000516539 103 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC090151.1-201ENST00000520784 730 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC022690.1-201ENST00000526681 550 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC087241.2-201ENST00000535801 324 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 PSMA3P-201ENST00000555485 635 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 TVP23BP1-201ENST00000557500 617 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR3921-201ENST00000577308 85 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 C8orf59P2-201ENST00000603441 271 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC092807.2-201ENST00000609367 243 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR6716-201ENST00000613413 80 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 OR52H1-202ENST00000641796 1061 ntBASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL158163.1-201ENST00000603915 1649 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.61-201ENST00000362835 102 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP307-201ENST00000362863 116 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA51.2-201ENST00000364595 132 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-1127P-201ENST00000384580 107 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL583835.1-201ENST00000399570 407 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 ARL5AP1-201ENST00000418991 388 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL27AP8-201ENST00000424277 446 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 VDAC1P3-201ENST00000434069 851 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 TAAR7P-201ENST00000436141 242 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 MTND4LP16-201ENST00000440828 295 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPS15AP27-201ENST00000449183 343 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC092001.1-201ENST00000453012 261 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-1208P-201ENST00000459588 107 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC083904.1-201ENST00000487828 231 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP001086.1-201ENST00000494882 321 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU4-49P-201ENST00000516080 140 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SCARNA15.2-201ENST00000516409 127 ntBASIC3.13□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA31.9-201ENST00000516429 84 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms