Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC023824.2-201ENST00000566185 400 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC133794.1-201ENST00000602731 914 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AL356280.1-201ENST00000603614 379 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC093838.1-201ENST00000613014 469 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 HMGB1P24-202ENST00000615653 685 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 MIR1264-201ENST00000616374 69 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC009090.3-201ENST00000616553 565 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 AC006213.5-201ENST00000619673 288 ntBASIC1.59□□□□□ -2.15
TRAV3A0A0B4J244 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRAV3A0A0B4J244 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 MTCO1P23-201ENST00000415223 1526 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 SNORD56.4-201ENST00000363883 71 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 RNU2-20P-201ENST00000410425 191 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 SRIP2-201ENST00000428470 166 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL512637.2-201ENST00000431287 1256 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 MYL8P-204ENST00000431574 518 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 GTF2IP20-201ENST00000431663 360 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC024082.2-201ENST00000434771 238 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC007000.2-201ENST00000442564 487 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL050341.1-201ENST00000447743 313 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 RPS15AP27-201ENST00000449183 343 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL513124.1-201ENST00000450410 614 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL139109.1-201ENST00000455491 297 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC090515.1-201ENST00000465295 476 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 RPL9P6-201ENST00000492764 598 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 RNU6-928P-201ENST00000516876 104 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC025755.1-201ENST00000521306 278 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AL512310.1-201ENST00000548639 172 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC091544.4-201ENST00000555268 342 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC104229.1-201ENST00000561364 255 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC068135.2-201ENST00000569293 1028 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 MIR3945-201ENST00000581853 98 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 MIR3935-201ENST00000583472 104 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC135507.1-201ENST00000607214 561 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC103710.1-201ENST00000610003 901 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 AC009902.3-201ENST00000606235 2172 ntBASIC1.58□□□□□ -2.16
TRAV3A0A0B4J244 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 ZNF849P-201ENST00000594711 1566 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 SNORD116-23-201ENST00000384645 92 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 MIR135A2-201ENST00000384854 100 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 MIR767-201ENST00000390228 109 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AP002784.2-201ENST00000397300 549 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL355497.1-201ENST00000406262 551 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL139098.1-201ENST00000407291 389 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RNU2-2P-201ENST00000410396 191 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 Z85995.1-201ENST00000415547 335 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 Z98742.3-201ENST00000418637 326 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 BEND7P1-201ENST00000422058 457 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 Z98742.2-201ENST00000431564 187 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC009237.8-201ENST00000445492 379 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RFC5P1-201ENST00000454419 874 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RNU7-26P-201ENST00000458980 63 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RPS27P21-201ENST00000486977 252 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC022493.1-201ENST00000492984 337 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 SCARNA11.3-201ENST00000517276 130 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 ATP5F1P5-201ENST00000526403 760 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 COX6CP5-201ENST00000527162 228 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AC005498.1-201ENST00000592125 465 ntBASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV3A0A0B4J244 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms