Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPIAP31-201ENST00000405422 495 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC009161.1-201ENST00000417306 376 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AL591704.1-201ENST00000432574 275 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 HMGB1P12-201ENST00000438594 598 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL23AP65-201ENST00000475608 468 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL39P36-201ENST00000490784 156 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 EIF4EP3-201ENST00000498782 656 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC092436.1-201ENST00000506450 503 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC025465.4-201ENST00000513422 638 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 SNORA70.16-201ENST00000516390 95 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 SNORA20.3-201ENST00000516880 132 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU6-143P-201ENST00000516942 93 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 MTND4P7-201ENST00000523876 130 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC103843.2-201ENST00000530523 682 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 OR5B10P-201ENST00000532869 642 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008521.1-201ENST00000587471 187 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AL139395.1-201ENST00000603662 160 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC007619.2-201ENST00000605743 379 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC025253.1-201ENST00000613623 543 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AC006504.8-201ENST00000621046 635 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 CPHL1P-201ENST00000461341 3407 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC016588.2-201ENST00000632484 3021 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR383-201ENST00000362257 73 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU1-108P-201ENST00000362556 161 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 SNORA72.1-201ENST00000363485 129 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU1-13P-201ENST00000384499 162 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU6-14P-201ENST00000384630 106 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR23B-201ENST00000384832 97 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 SNORA11F-201ENST00000408237 128 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL30P2-201ENST00000414021 291 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL21P111-201ENST00000418453 477 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC012498.1-201ENST00000424037 437 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MTND5P20-201ENST00000448677 143 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MTCYBP18-201ENST00000501056 747 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC018710.1-201ENST00000506509 158 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC117522.3-201ENST00000507974 584 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 LRRC34P2-201ENST00000514850 553 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP315-201ENST00000516340 116 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP312-201ENST00000517068 116 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MYL12AP1-201ENST00000518490 515 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL137161.1-201ENST00000532231 390 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 OR8R1P-201ENST00000543943 764 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL7P50-201ENST00000600588 727 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008638.3-201ENST00000603341 463 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL158032.1-201ENST00000605401 106 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL591034.3-201ENST00000605511 685 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL355073.2-201ENST00000612106 557 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AC048347.1-201ENST00000624621 427 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 ASNSP3-201ENST00000451989 1306 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 AL672296.1-201ENST00000427780 2158 ntBASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA9Q9Y5G4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms