Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL138820.1-201ENST00000617901 5305 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.26-201ENST00000362539 101 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.48-201ENST00000362710 103 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RNU4-42P-201ENST00000364738 142 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AL359837.1-201ENST00000381357 287 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-33P-201ENST00000384793 107 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-1156P-201ENST00000410365 100 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC108032.1-201ENST00000416706 207 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC099677.1-201ENST00000420575 175 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 ELOCP20-201ENST00000422460 345 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RBMY1KP-201ENST00000423480 476 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RPS29P9-201ENST00000440360 171 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AL162591.2-201ENST00000449634 317 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 MTND4LP30-201ENST00000454092 297 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RPL23AP31-201ENST00000456160 467 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 snoU13.22-201ENST00000459428 104 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RNU7-169P-201ENST00000459456 61 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RN7SL189P-201ENST00000468631 289 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC069499.1-201ENST00000489433 509 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 MTND1P19-201ENST00000511780 315 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-570P-201ENST00000517051 105 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RAC1P9-201ENST00000604990 392 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 Z73965.1-201ENST00000623412 2297 ntBASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZC3H4Q9UPT8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC100757.1-201ENST00000616872 1835 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-288P-201ENST00000363690 104 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 RNA5SP28-201ENST00000363841 119 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.214-201ENST00000364201 112 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 RNA5SP509-201ENST00000364577 119 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-806P-201ENST00000365147 105 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SNORA70.6-201ENST00000383934 134 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SNORA51.11-201ENST00000384442 131 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.577-201ENST00000384794 101 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AP000580.1-201ENST00000404439 358 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC092447.6-201ENST00000414578 210 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SYF2P2-201ENST00000417620 583 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 BX323845.1-201ENST00000432417 179 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AL132765.1-201ENST00000434165 553 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC073465.2-201ENST00000440938 498 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AP000942.1-201ENST00000463969 747 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 MIR2116-201ENST00000517221 80 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AP006587.4-201ENST00000526053 529 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AP003385.6-201ENST00000531603 374 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC084783.1-201ENST00000565846 910 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC104763.2-201ENST00000604179 382 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 ABCC13-202ENST00000463099 3842 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 SCARNA15-201ENST00000607520 4325 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 AC116667.1-201ENST00000604855 2072 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.04□□□□□ -1.44
ZC3H4Q9UPT8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms