Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL590103.1-201ENST00000434488 307 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 snoU13.15-201ENST00000459407 104 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 RPS23P3-201ENST00000470993 430 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC072039.1-201ENST00000477611 581 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 LRRC34P1-201ENST00000542742 915 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 OR7K1P-201ENST00000546439 926 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC017037.3-201ENST00000625016 472 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AL513185.3-201ENST00000433335 1300 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 AL031985.3-201ENST00000565390 2449 ntBASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM4Q9ULL8 RHEBP3-201ENST00000411920 351 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 SSXP9-201ENST00000417503 292 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 MTND4P20-201ENST00000424125 869 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 UBE2FP3-201ENST00000436366 524 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC004263.1-201ENST00000479327 332 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 SCGB1D5P-201ENST00000515134 247 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC109329.2-201ENST00000519658 482 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AP000811.1-201ENST00000603803 651 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AL035413.2-201ENST00000604801 525 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC097468.3-201ENST00000607956 456 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 PLCE1P1-201ENST00000622094 305 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC073476.4-201ENST00000628409 72 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AC092326.2-201ENST00000624772 1561 ntBASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM4Q9ULL8 AP000567.1-201ENST00000406413 156 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 Z98941.1-201ENST00000407764 100 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 BX119904.4-201ENST00000424402 301 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 MTND5P25-201ENST00000430499 799 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL117351.1-201ENST00000438864 766 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 RPS20P22-201ENST00000473700 357 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 RN7SKP60-201ENST00000516985 239 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 ATP5F1P5-201ENST00000526403 760 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC009268.2-201ENST00000621925 457 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC079597.1-201ENST00000624306 508 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 MIR4275-201ENST00000636486 87 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 RPS4XP5-202ENST00000449995 1334 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 RNA5SP21-201ENST00000410917 96 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 RPL27AP8-201ENST00000424277 446 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 WASF1P1-201ENST00000447560 1131 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL592447.1-201ENST00000447592 540 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AP002884.2-201ENST00000471647 395 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC078785.3-201ENST00000476607 425 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 MIR4644-201ENST00000579929 84 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC098826.3-201ENST00000603823 466 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AC106900.2-201ENST00000604994 317 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL591516.1-201ENST00000611326 274 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 AL110115.1-201ENST00000614396 364 ntBASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM4Q9ULL8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 Y_RNA.302-201ENST00000364997 102 ntBASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 AL365396.1-201ENST00000430854 671 ntBASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 ATG12P2-201ENST00000456830 416 ntBASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 HMGB1P36-201ENST00000487709 576 ntBASIC5.5□□□□□ -1.53
SHROOM4Q9ULL8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms