Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 RNU4-51P-201ENST00000364206 140 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AC241520.1-201ENST00000422654 1099 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 RPS29P1-201ENST00000465274 159 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 RNA5SP468-201ENST00000516782 93 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AC016957.1-201ENST00000534895 309 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AC068831.7-201ENST00000616954 363 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
SCN11AQ9UI33 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.79□□□□□ -2.12
SCN11AQ9UI33 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 AC245128.3-201ENST00000594721 748 ntBASIC1.79□□□□□ -2.12
SCN11AQ9UI33 AL133216.2-202ENST00000634512 349 ntBASIC1.79□□□□□ -2.12
SCN11AQ9UI33 MIR3199-2-201ENST00000636243 86 ntBASIC1.79□□□□□ -2.12
SCN11AQ9UI33 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SCN11AQ9UI33 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN11AQ9UI33 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN11AQ9UI33 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 RNU4-72P-201ENST00000410754 173 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AC013268.2-201ENST00000420753 337 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AL512661.1-201ENST00000434586 1253 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 COX6CP14-201ENST00000469580 174 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN11AQ9UI33 IGKV2D-36-201ENST00000518643 226 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AC087808.1-201ENST00000520501 361 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AP004607.1-201ENST00000524456 203 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AL731537.2-201ENST00000561565 951 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AL592494.3-201ENST00000609485 464 ntBASIC1.78□□□□□ -2.12
SCN11AQ9UI33 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN11AQ9UI33 AL355497.1-201ENST00000406262 551 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC096632.1-201ENST00000427395 310 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 RPL21P134-201ENST00000453468 483 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC234775.1-201ENST00000454247 670 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC034222.1-201ENST00000494052 532 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AP005660.1-201ENST00000522972 293 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC009127.3-201ENST00000570531 403 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 MIR151B-201ENST00000584249 96 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 MIR320A-201ENST00000385302 82 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 RNA5SP38-201ENST00000410750 119 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 SRIP3-201ENST00000413200 219 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 MTCYBP7-201ENST00000419540 1134 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 MTND2P29-201ENST00000438595 412 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AL513321.1-201ENST00000441175 761 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 RPL23AP33-201ENST00000442301 452 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 COX6CP12-201ENST00000446748 202 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AC069277.2-201ENST00000454211 432 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AL139109.1-201ENST00000455491 297 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN11AQ9UI33 RPS15AP11-201ENST00000594193 385 ntBASIC1.77□□□□□ -2.13
SCN11AQ9UI33 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 CDC27P3-201ENST00000635418 1910 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 RNU4-7P-201ENST00000364758 141 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC244098.2-201ENST00000422068 99 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 KATNBL1P3-201ENST00000443475 909 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC023813.2-201ENST00000564321 469 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 MTATP6P3-201ENST00000581686 676 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 AL359851.1-201ENST00000569460 4997 ntBASIC1.76□□□□□ -2.13
SCN11AQ9UI33 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SCN11AQ9UI33 Y_RNA.205-201ENST00000364128 113 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 MIR598-201ENST00000384868 97 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 RNU4-65P-201ENST00000410473 140 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 Z75741.2-201ENST00000417272 1167 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 SNRPEP4-201ENST00000435815 279 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 RPL7P18-201ENST00000478965 734 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 U73479.1-201ENST00000618062 168 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 MTCO1P4-201ENST00000520516 1409 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms