Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 MTCO2P25-201ENST00000447065 681 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL590664.1-201ENST00000448065 339 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 TPTE2P5-203ENST00000458118 728 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 TMEM251P1-201ENST00000503717 318 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC118465.1-201ENST00000513820 1271 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AP000857.1-201ENST00000532151 543 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC007834.2-201ENST00000536310 343 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 HPRT1P3-201ENST00000539521 576 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 OSBPL9P5-201ENST00000542581 171 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC091057.2-201ENST00000602594 792 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC106791.2-201ENST00000604680 391 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL359198.2-201ENST00000611836 194 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC243773.3-201ENST00000613270 256 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLIP2Q9UDT6 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 Y_RNA.408-201ENST00000383987 102 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 SNORD116-12-201ENST00000384468 92 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 RNU6-906P-201ENST00000384700 70 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AL360182.1-201ENST00000397433 468 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AL590084.1-201ENST00000407885 387 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 RPL23AP20-201ENST00000447965 421 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC005297.2-201ENST00000450430 606 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 RPL23AP94-201ENST00000512518 302 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC034159.1-201ENST00000513885 583 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 HSPE1P20-201ENST00000538133 289 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 CR383656.7-201ENST00000548164 174 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 MTCYBP23-201ENST00000558717 1102 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC009097.3-201ENST00000563557 1018 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 VN1R78P-201ENST00000597393 564 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 BNIP3P26-201ENST00000600827 554 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC007619.2-201ENST00000605743 379 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC107952.2-201ENST00000606048 486 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC092106.3-201ENST00000611308 722 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC021755.4-201ENST00000616620 456 ntBASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CLIP2Q9UDT6 AL513185.3-201ENST00000433335 1300 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 FAM35BP-202ENST00000497389 3337 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC062016.1-201ENST00000355719 319 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RNU6-560P-201ENST00000364007 108 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RNU6-1122P-201ENST00000384449 107 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL356131.1-201ENST00000405826 414 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RNA5SP492-201ENST00000411330 114 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RPL19P1-201ENST00000411635 428 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL589823.1-201ENST00000429577 183 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 MTND4P6-201ENST00000438297 472 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL589880.1-201ENST00000448271 287 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL353691.1-201ENST00000451332 387 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RPL18AP17-201ENST00000455326 198 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 SNORD109B-201ENST00000458961 67 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 SNORD109A-201ENST00000459128 67 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 SNORD11.1-201ENST00000459482 85 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RNU6-583P-201ENST00000516012 92 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC087373.1-201ENST00000524920 491 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 OR10V3P-201ENST00000525712 725 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 MED28P6-201ENST00000558776 231 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 MIR4672-201ENST00000583126 81 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC106900.2-201ENST00000604994 317 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC012443.1-201ENST00000605605 231 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 RPL23AP88-201ENST00000605759 454 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 OR2AS2P-201ENST00000606902 342 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 AC010338.1-201ENST00000621823 717 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms