Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AL671309.1-201ENST00000603750 544 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC013553.2-201ENST00000604244 589 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AL031176.1-201ENST00000604554 466 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC120053.1-201ENST00000607706 736 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC006213.4-201ENST00000616184 634 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC010378.1-201ENST00000619270 362 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC012640.5-201ENST00000623897 319 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 MTCO1P23-201ENST00000415223 1526 ntBASIC1.96□□□□□ -2.09
VPS29Q9UBQ0 HMGB1P5-201ENST00000255320 642 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 SNORA3A-201ENST00000364113 130 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 TRGVB-201ENST00000453257 471 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC097493.1-201ENST00000463958 372 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC017037.2-201ENST00000513850 890 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 CR383656.7-201ENST00000548164 174 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 MTCYBP27-201ENST00000555160 670 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC233266.2-201ENST00000567067 528 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 SNORD53-201ENST00000579969 78 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AF131215.7-201ENST00000602443 707 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC092954.1-201ENST00000609121 445 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC093838.1-201ENST00000613014 469 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC025594.3-201ENST00000613068 790 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AL356266.1-201ENST00000623311 483 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 AC080100.1-201ENST00000624239 5356 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
VPS29Q9UBQ0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 SGO1P1-201ENST00000603525 1447 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 RNU6-619P-201ENST00000365146 108 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 MIR16-1-201ENST00000385271 89 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC016769.3-201ENST00000396562 315 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 RNU2-47P-201ENST00000410649 186 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 RNU6-920P-201ENST00000410926 92 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AL590623.1-201ENST00000427864 105 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC005345.1-201ENST00000431868 217 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 USP12PX-201ENST00000432383 1057 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 THAP5P1-201ENST00000439089 262 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 ARF4P4-201ENST00000439608 520 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 RPL26P6-201ENST00000440913 438 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 USP9YP8-201ENST00000441913 500 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 DDX3P2-201ENST00000446138 111 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 ANKRD26P4-201ENST00000455755 950 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC108734.3-201ENST00000481241 1165 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC118942.1-201ENST00000529674 1035 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC011611.5-201ENST00000552477 578 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 SULT1C2P1-202ENST00000562418 459 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 MIR1264-201ENST00000616374 69 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AC011330.2-201ENST00000621680 635 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 AL049641.1-201ENST00000441055 1948 ntBASIC1.95□□□□□ -2.1
VPS29Q9UBQ0 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 DDX10P1-201ENST00000448545 1933 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 MIR449A-201ENST00000362113 91 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AL139098.1-201ENST00000407291 389 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 BEND7P1-201ENST00000422058 457 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 NDUFB4P7-201ENST00000423198 363 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AL356867.1-201ENST00000429623 299 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AL512637.2-201ENST00000431287 1256 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 Z80107.1-201ENST00000436830 412 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms