Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 MTCYBP18-201ENST00000501056 747 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 LTV1P1-201ENST00000510683 1237 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AP001180.3-201ENST00000582221 145 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 uc_338.12-201ENST00000616344 181 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC006249.1-201ENST00000621223 471 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC015726.3-201ENST00000624501 418 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 AC009950.2-201ENST00000636548 183 ntBASIC1.91□□□□□ -2.1
PHRF1Q9P1Y6 RNU4-51P-201ENST00000364206 140 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 HSPE1P1-201ENST00000421494 318 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 MTCO3P17-201ENST00000443775 513 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 AC104629.2-201ENST00000468627 598 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 SYF2P1-201ENST00000550658 413 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 MTCO2P22-201ENST00000603246 681 ntBASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PHRF1Q9P1Y6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 MTND4P34-201ENST00000572715 1371 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 DNAJC19P6-201ENST00000401853 280 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 SRIP3-201ENST00000413200 219 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AC023347.2-201ENST00000433994 462 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AC090774.1-201ENST00000435925 246 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 GTF2IP7-202ENST00000436677 309 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 AC139103.1-201ENST00000534696 1030 ntBASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.89□□□□□ -2.11
PHRF1Q9P1Y6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MIR320A-201ENST00000385302 82 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MIR1304-201ENST00000408243 91 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AC244098.2-201ENST00000422068 99 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AL513321.1-201ENST00000441175 761 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AC004223.1-201ENST00000479840 271 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MTCO2P32-201ENST00000514865 403 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 PCNAP1-202ENST00000595299 752 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 SNORD56.5-201ENST00000364281 72 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 RPL23AP47-201ENST00000408017 460 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 BX682237.1-201ENST00000415016 335 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 RPS6P15-201ENST00000431996 751 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 IFNA20P-201ENST00000436840 528 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 RPL23AP41-201ENST00000484754 458 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MTCO3P24-201ENST00000572729 782 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MIR3690-201ENST00000580266 75 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AP003117.1-201ENST00000602771 554 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 BNIP3P4-201ENST00000604946 565 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MIR6078-201ENST00000611069 100 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.88□□□□□ -2.11
PHRF1Q9P1Y6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 RNU2-71P-201ENST00000411395 189 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 LSM1P1-201ENST00000438629 273 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AC023512.1-201ENST00000444513 499 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 COX6CP12-201ENST00000446748 202 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 RPS29P1-201ENST00000465274 159 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AC104472.2-201ENST00000469035 601 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 COX6CP14-201ENST00000469580 174 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AL359273.1-201ENST00000510918 627 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AC117525.1-201ENST00000515228 503 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 AC090525.3-201ENST00000605601 189 ntBASIC1.87□□□□□ -2.11
PHRF1Q9P1Y6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 RNU6-461P-201ENST00000364195 107 ntBASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 SNORD121B-201ENST00000458838 81 ntBASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.86□□□□□ -2.11
PHRF1Q9P1Y6 SEM1P1-201ENST00000506694 209 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms