Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 BX322784.1-201ENST00000455793 1077 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RNU6-714P-201ENST00000516963 103 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 MTND3P13-201ENST00000574391 343 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 NRBF2P5-201ENST00000603087 788 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC008277.2-201ENST00000605196 797 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC024560.3-201ENST00000608482 349 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC034102.8-201ENST00000615146 484 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AL159972.1-201ENST00000625150 448 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC022336.2-201ENST00000568966 2538 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 RNU6-359P-201ENST00000365466 108 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 MIR181B1-201ENST00000385240 110 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC008850.1-201ENST00000427546 362 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 RPS15AP7-201ENST00000439294 405 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 MTND2P24-201ENST00000453434 806 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL049829.1-201ENST00000465411 156 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AP000852.1-201ENST00000472460 573 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC004924.1-201ENST00000480160 781 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 LARP1BP2-201ENST00000486594 519 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC008716.1-201ENST00000511084 513 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 RNY4P37-201ENST00000516225 96 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 COX6CP5-201ENST00000527162 228 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AP002748.2-201ENST00000528671 348 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL359198.2-201ENST00000611836 194 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AL603758.1-201ENST00000618654 241 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 AC231657.1-201ENST00000624313 397 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
KLHL28Q9NXS3 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.59□□□□□ -2
KLHL28Q9NXS3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 CR848007.1-201ENST00000442354 1699 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.58□□□□□ -2
KLHL28Q9NXS3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KLHL28Q9NXS3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.58□□□□□ -2
KLHL28Q9NXS3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.58□□□□□ -2
KLHL28Q9NXS3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 RNA5SP80-201ENST00000410475 111 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 TIMM9P2-201ENST00000419324 266 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 RPL39P40-201ENST00000445481 146 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 WASF1P1-201ENST00000447560 1131 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 GSTA11P-201ENST00000452866 669 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 RNA5SP356-201ENST00000515972 94 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 MTND2P7-201ENST00000521337 640 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC118942.1-201ENST00000529674 1035 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 OR6C7P-201ENST00000547875 934 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 AL353997.4-201ENST00000586196 166 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 BBIP1P1-201ENST00000602999 279 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 RPL12P50-201ENST00000603116 116 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms