Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC005498.1-201ENST00000592125 465 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 VN1R83P-201ENST00000595685 445 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC004987.4-201ENST00000603383 338 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL158163.2-201ENST00000619110 700 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC123767.1-202ENST00000620407 817 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 MIR8057-201ENST00000620957 69 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AP003399.1-201ENST00000637534 361 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 RNU6-637P-201ENST00000384050 107 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 SNORA9-201ENST00000384215 133 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 MIR670-201ENST00000390142 98 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC080125.1-201ENST00000414888 684 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 BX119904.4-201ENST00000424402 301 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AL358075.3-201ENST00000426289 226 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC087499.2-201ENST00000432861 149 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 FGF7P5-201ENST00000441829 291 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC002381.1-201ENST00000447049 280 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 RPL31P50-201ENST00000471002 296 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 RPS15AP34-201ENST00000487776 387 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 MRPS36P2-201ENST00000512569 299 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 RNA5SP291-201ENST00000517222 105 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 TRAV28-201ENST00000557548 323 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 CYCSP39-201ENST00000565821 309 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 MTND3P13-201ENST00000574391 343 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC034102.8-201ENST00000615146 484 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 AC104985.3-201ENST00000623479 597 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 OR8B1P-202ENST00000641132 1178 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.31□□□□□ -2.04
CLN6Q9NWW5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLN6Q9NWW5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AL161781.1-201ENST00000354277 403 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RNA5SP393-201ENST00000363423 117 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RNU6-359P-201ENST00000365466 108 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 MIR9-1-201ENST00000385198 89 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 TPMTP3-201ENST00000411928 735 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 TIMM9P2-201ENST00000419324 266 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 MTCO2P17-201ENST00000424336 677 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC007919.1-201ENST00000429380 217 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 GTF2IP20-201ENST00000431663 360 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC098826.1-201ENST00000433943 471 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RPS15AP7-201ENST00000439294 405 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 BNIP3P2-201ENST00000441221 577 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 PIGFP3-201ENST00000441918 722 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AP1S2P1-201ENST00000457344 379 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RPS20P20-201ENST00000460498 340 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 RPL30P9-201ENST00000465586 330 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC133134.1-201ENST00000466800 359 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC104629.1-201ENST00000494226 508 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC138853.1-201ENST00000503549 823 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC008716.1-201ENST00000511084 513 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC113155.1-201ENST00000511141 769 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 MTND1P36-201ENST00000522384 936 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AL512347.1-201ENST00000566420 503 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC005951.2-201ENST00000576282 495 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 OR1M4P-201ENST00000589199 287 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC103710.4-201ENST00000609301 899 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC093838.1-201ENST00000613014 469 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC104763.3-201ENST00000613765 618 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC013476.2-201ENST00000614456 459 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AC079395.3-201ENST00000615161 484 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 AL138955.1-201ENST00000622881 1040 ntBASIC2.3□□□□□ -2.04
CLN6Q9NWW5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.3□□□□□ -2.04
CLN6Q9NWW5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms