Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2□□□□□ -2.09
CISHQ9NSE2 AP000916.1-201ENST00000533869 835 ntBASIC2□□□□□ -2.09
CISHQ9NSE2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CISHQ9NSE2 AP002826.1-201ENST00000608835 315 ntBASIC2□□□□□ -2.09
CISHQ9NSE2 AC096586.1-201ENST00000610267 561 ntBASIC2□□□□□ -2.09
CISHQ9NSE2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC009902.3-201ENST00000606235 2172 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 SNORA51.11-201ENST00000384442 131 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 U3.20-201ENST00000390909 217 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 SNORA11.2-201ENST00000408318 127 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC008173.1-201ENST00000418901 264 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 RPL7L1P10-201ENST00000427790 463 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 HMGB3P12-201ENST00000438745 556 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 COX6CP12-201ENST00000446748 202 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC087588.1-201ENST00000462203 316 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 TRBV1-201ENST00000476502 284 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AL135752.1-201ENST00000479477 471 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 RNU6-551P-201ENST00000516661 103 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC233266.2-201ENST00000567067 528 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AL355802.4-201ENST00000607635 548 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AC112503.2-201ENST00000609005 552 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 AP000254.1-201ENST00000609934 520 ntBASIC1.99□□□□□ -2.09
CISHQ9NSE2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CISHQ9NSE2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 HSPE1P11-201ENST00000339579 310 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 MIR767-201ENST00000390228 109 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 RNU6-1197P-201ENST00000391183 107 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 RNU4-72P-201ENST00000410754 173 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AL513331.1-201ENST00000411908 397 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 Z75741.2-201ENST00000417272 1167 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 BX276092.3-201ENST00000424182 230 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC092573.2-201ENST00000434546 243 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 snoU13.15-201ENST00000459407 104 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 NDUFB4P2-201ENST00000509515 391 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC103833.1-201ENST00000517442 172 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC124293.1-201ENST00000530034 493 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 OR4P1P-201ENST00000530808 1136 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC068339.2-201ENST00000534395 618 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC009127.3-201ENST00000570531 403 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 RPS15AP11-201ENST00000594193 385 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC068790.3-201ENST00000602988 553 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 RPAP2P1-201ENST00000603626 1168 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC079791.1-201ENST00000605356 973 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC009487.4-201ENST00000624969 3585 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.98□□□□□ -2.09
CISHQ9NSE2 TPTE2P4-201ENST00000258589 1605 ntBASIC1.98□□□□□ -2.09
CISHQ9NSE2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CISHQ9NSE2 AC022336.2-201ENST00000568966 2538 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC008568.2-201ENST00000623862 2313 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CISHQ9NSE2 RNU6-1155P-201ENST00000363554 107 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 MIR524-201ENST00000385242 87 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 MIR1261-201ENST00000408659 82 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 MORF4L1P6-201ENST00000418771 268 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC012497.1-201ENST00000429392 575 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL714022.1-201ENST00000439897 151 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC092170.1-201ENST00000440211 356 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL121871.1-201ENST00000443413 436 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL929288.2-201ENST00000446368 407 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 MTND2P6-201ENST00000455337 1030 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 MTCO3P2-201ENST00000457365 171 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC116337.2-201ENST00000477662 156 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC093767.1-201ENST00000504523 156 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 MRPS36P2-201ENST00000512569 299 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 RNU6-27P-201ENST00000516146 107 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms