Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC091925.2-201ENST00000625059 256 ntBASIC4.34□□□□□ -1.71
GCM1Q9NP62 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.34□□□□□ -1.71
GCM1Q9NP62 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.34□□□□□ -1.71
GCM1Q9NP62 AC108751.5-201ENST00000492880 1336 ntBASIC4.34□□□□□ -1.71
GCM1Q9NP62 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GCM1Q9NP62 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.34□□□□□ -1.72
GCM1Q9NP62 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
GCM1Q9NP62 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
GCM1Q9NP62 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.34□□□□□ -1.72
GCM1Q9NP62 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 SNURFL-201ENST00000309296 343 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 RNU6-774P-201ENST00000363238 107 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 Y_RNA.151-201ENST00000363566 112 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 RNVU1-3-201ENST00000364313 161 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 AL139039.1-201ENST00000401900 692 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 RN7SKP114-201ENST00000410327 279 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 RPL23AP27-201ENST00000415161 451 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 SYF2P2-201ENST00000417620 583 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 BX276092.3-201ENST00000424182 230 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 RN7SL443P-201ENST00000464331 290 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC053481.1-201ENST00000467217 306 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC012339.2-201ENST00000523996 453 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 AP003733.2-201ENST00000529409 171 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 AL161713.1-201ENST00000555538 145 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 HNRNPCP4-201ENST00000571636 900 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC022884.2-201ENST00000578535 580 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 VN1R91P-201ENST00000594377 169 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC174048.1-201ENST00000603389 144 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AL713866.2-201ENST00000603579 219 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC104687.2-201ENST00000604442 342 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AP005432.2-201ENST00000608162 586 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 AC211433.2-201ENST00000608433 387 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
GCM1Q9NP62 PCAT14-202ENST00000627127 3935 ntBASIC4.33□□□□□ -1.72
GCM1Q9NP62 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GCM1Q9NP62 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU6-212P-201ENST00000362642 104 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNA5SP305-201ENST00000362665 119 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU6-596P-201ENST00000365395 98 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU6-338P-201ENST00000383888 105 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU6-662P-201ENST00000384253 104 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 SNORD51-201ENST00000384320 80 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 SNORA70-201ENST00000384436 135 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 SNORA51.11-201ENST00000384442 131 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 GLULP6-201ENST00000399502 913 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 NEFMP1-201ENST00000443423 1006 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 CEACAMP7-201ENST00000444105 496 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC073850.1-201ENST00000449243 255 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 IGHV5-78-201ENST00000450948 295 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU7-138P-201ENST00000459479 64 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 RPL37P6-202ENST00000464216 403 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC069499.1-201ENST00000489433 509 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 RNU6-897P-201ENST00000517135 105 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC044860.2-201ENST00000561005 179 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC090517.1-201ENST00000569307 266 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC093227.2-201ENST00000589357 285 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC004792.1-201ENST00000614523 137 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AP002799.1-201ENST00000623552 423 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC110801.1-201ENST00000623590 212 ntBASIC4.32□□□□□ -1.72
GCM1Q9NP62 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GCM1Q9NP62 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms