Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MTATP6P14-201ENST00000455189 673 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC113155.1-201ENST00000511141 769 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 SNORA31.18-201ENST00000517043 134 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC091163.3-201ENST00000518269 1144 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL158050.2-201ENST00000605336 568 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL136370.1-201ENST00000608166 691 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC024560.3-201ENST00000608482 349 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC004067.1-201ENST00000608733 700 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC034102.8-201ENST00000615146 484 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AL596245.1-201ENST00000618994 362 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 MIR1322-201ENST00000638013 71 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 AC007785.2-201ENST00000598627 1916 ntBASIC2.8□□□□□ -1.96
TM9SF3Q9HD45 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC107982.1-201ENST00000507171 1300 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 SNRPEP3-201ENST00000338402 276 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNU6-236P-201ENST00000363886 106 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 Y_RNA.408-201ENST00000383987 102 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNU6-224P-201ENST00000384055 107 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNU6-1257P-201ENST00000384625 110 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 MIR34A-201ENST00000385130 110 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AL079342.2-201ENST00000403367 482 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 MTND4P3-201ENST00000417829 541 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC098614.2-201ENST00000426040 255 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RPS15AP7-201ENST00000439294 405 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 MTCYBP3-201ENST00000445588 1137 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 BMI1P1-201ENST00000445879 941 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RPS27AP9-201ENST00000477681 438 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC114322.1-201ENST00000506771 926 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNU6-1256P-201ENST00000516539 103 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 RNA5SP471-201ENST00000516971 106 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 SUB1P1-201ENST00000524415 382 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AP002748.2-201ENST00000528671 348 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 MIR4435-1-201ENST00000582552 80 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AP001429.1-201ENST00000602568 530 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC018645.2-201ENST00000609151 472 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AL020991.1-201ENST00000612314 373 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC008443.7-201ENST00000622195 246 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 AC104985.3-201ENST00000623479 597 ntBASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
TM9SF3Q9HD45 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 RNU1-112P-201ENST00000364401 164 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 GTF2IP3-201ENST00000433887 494 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AL135752.1-201ENST00000479477 471 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC114981.1-201ENST00000503897 678 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 TTC39CP1-201ENST00000512513 755 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 DEFB130C-202ENST00000530001 230 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 GLYCAM1-201ENST00000546596 285 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 OR1M4P-201ENST00000589199 287 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC069431.2-201ENST00000604149 1099 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC112220.2-201ENST00000605513 533 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC026790.2-201ENST00000606282 430 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC010975.3-201ENST00000618727 978 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC009039.2-201ENST00000624524 529 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 AC010149.2-201ENST00000637608 315 ntBASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TM9SF3Q9HD45 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.97
TM9SF3Q9HD45 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
TM9SF3Q9HD45 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 OR4G2P-202ENST00000641004 1759 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 RNU6-28P-201ENST00000362378 107 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 RNU6-859P-201ENST00000362728 107 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 Y_RNA.472-201ENST00000384322 102 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 MIR122-201ENST00000385044 85 ntBASIC2.77□□□□□ -1.97
TM9SF3Q9HD45 MIR9-1-201ENST00000385198 89 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms