Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RPS29P25-201ENST00000481709 171 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC078817.1-201ENST00000492623 435 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC074344.1-201ENST00000512823 224 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC104383.1-201ENST00000530297 370 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC244505.7-201ENST00000599675 272 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC012669.1-201ENST00000603209 283 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 DUXAP9-208ENST00000622815 614 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC099654.14-201ENST00000638599 341 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP29Q9HBJ7 CR848007.1-201ENST00000442354 1699 ntBASIC3.9□□□□□ -1.78
USP29Q9HBJ7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.9□□□□□ -1.78
USP29Q9HBJ7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.78
USP29Q9HBJ7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USP29Q9HBJ7 AC010733.2-201ENST00000589496 5702 ntBASIC3.9□□□□□ -1.78
USP29Q9HBJ7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 SNORA71.3-201ENST00000362582 128 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 RNU6-534P-201ENST00000364877 106 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 RNU6-456P-201ENST00000384493 107 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 FGF7P8-201ENST00000402994 292 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 RN7SKP156-201ENST00000410308 342 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC007967.1-201ENST00000455422 1159 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AP000873.1-201ENST00000463987 400 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 FCF1P3-201ENST00000496394 590 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 SCARNA14-201ENST00000516903 136 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 RNU6-798P-201ENST00000516912 103 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AP000857.1-201ENST00000532151 543 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AL133271.1-201ENST00000538229 291 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC007424.1-203ENST00000554613 687 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AL133153.1-201ENST00000557756 303 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC025449.1-201ENST00000603896 529 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC004908.2-201ENST00000609090 574 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC005344.1-201ENST00000613391 459 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC006338.1-201ENST00000618453 749 ntBASIC3.9□□□□□ -1.79
USP29Q9HBJ7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP29Q9HBJ7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 SNORD46.1-201ENST00000364139 104 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC068050.1-201ENST00000394891 380 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 SOD2P1-201ENST00000396543 562 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL583834.1-201ENST00000406943 343 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 SNORA3.3-201ENST00000408712 125 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RN7SKP177-201ENST00000410567 355 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 HMGN1P24-201ENST00000412282 298 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 EI24P1-201ENST00000416584 867 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 USP9YP27-201ENST00000418455 438 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 OR4K11P-201ENST00000431829 904 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RPL23AP30-201ENST00000432419 501 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 NEK4P1-201ENST00000433383 879 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms