Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RN7SL293P-201ENST00000481765 281 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 SNORA9.3-201ENST00000516383 129 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 HSPA8P13-201ENST00000523715 472 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AP002748.2-201ENST00000528671 348 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AP000857.1-201ENST00000532151 543 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AP000873.5-201ENST00000533906 236 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 LSM6P2-201ENST00000552208 177 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AL157394.1-201ENST00000562983 1224 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC025165.5-201ENST00000602802 578 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC012360.2-201ENST00000609349 391 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC104073.3-201ENST00000610942 955 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC009318.4-201ENST00000620496 486 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AL445264.1-201ENST00000621719 171 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC025048.6-202ENST00000627667 438 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF2Q9HAU5 MIR6733-201ENST00000635723 61 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 AC010733.2-201ENST00000589496 5702 ntBASIC3.56□□□□□ -1.84
UPF2Q9HAU5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC009487.2-201ENST00000420969 6821 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 FGF7P2-201ENST00000332473 296 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 Y_RNA.41-201ENST00000362646 102 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 SNORA9.2-201ENST00000365361 133 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RNU6-769P-201ENST00000384407 104 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 Y_RNA.548-201ENST00000384656 105 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RNY3P10-201ENST00000384764 102 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 MIR23B-201ENST00000384832 97 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 U3.19-201ENST00000390893 196 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 HMGB1P11-201ENST00000413899 637 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 MTCO1P21-201ENST00000416634 589 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AL139281.1-201ENST00000422120 335 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 ELOCP30-201ENST00000447108 299 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 ARPC3P5-201ENST00000448802 534 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC008155.2-201ENST00000464337 397 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC011825.1-201ENST00000484967 388 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC010625.1-201ENST00000511296 403 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RNA5SP76-201ENST00000516277 87 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC013828.2-201ENST00000532487 235 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 MIR5697-201ENST00000578045 78 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC068276.1-201ENST00000605793 379 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC090186.1-201ENST00000605991 572 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AL590240.3-201ENST00000621416 943 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AL603839.4-201ENST00000624658 1005 ntBASIC3.55□□□□□ -1.84
UPF2Q9HAU5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UPF2Q9HAU5 AC110774.1-201ENST00000623567 2018 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNU6-297P-201ENST00000384636 107 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RN7SKP266-201ENST00000410232 287 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNU4-78P-201ENST00000410940 126 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC109780.2-201ENST00000413467 845 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 MTCO3P41-201ENST00000414801 328 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC002381.1-201ENST00000447049 280 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNA5SP269-201ENST00000459032 137 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RPS26P21-201ENST00000475397 348 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AP000797.1-201ENST00000478870 387 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 MTCO3P44-201ENST00000510977 541 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNA5SP216-201ENST00000516111 123 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RN7SKP244-201ENST00000516513 307 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms