Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC087588.1-201ENST00000462203 316 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC104563.1-201ENST00000476147 376 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC006445.1-201ENST00000491925 405 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC006499.5-201ENST00000505037 514 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC079395.1-201ENST00000510981 262 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RNU6-150P-201ENST00000516237 95 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC007115.1-201ENST00000546853 234 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 YWHAZP1-201ENST00000556286 722 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 TRAV28-201ENST00000557548 323 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC010546.1-201ENST00000569391 485 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AL161729.4-201ENST00000604650 476 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AL035413.2-201ENST00000604801 525 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC245389.1-201ENST00000605141 529 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC093838.1-201ENST00000613014 469 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 MIR7112-201ENST00000616126 65 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AL049777.1-201ENST00000622740 518 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AP003399.1-201ENST00000637534 361 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC092447.10-201ENST00000620607 1652 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RNA5SP456-201ENST00000364002 114 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RNU1-112P-201ENST00000364401 164 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RNU6-217P-201ENST00000384164 104 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 MIR200C-201ENST00000384980 68 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RNU6-754P-201ENST00000391166 107 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ERHP2-201ENST00000402323 299 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 MTND1P21-201ENST00000412991 285 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AL049734.2-201ENST00000441066 616 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AL358232.1-201ENST00000448030 501 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AP1S2P1-201ENST00000457344 379 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 MTND4LP3-201ENST00000468320 276 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 OR5BM1P-201ENST00000512021 366 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC112206.4-201ENST00000515142 405 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RN7SKP57-201ENST00000517248 293 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 NRON-201ENST00000517270 370 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC026241.1-201ENST00000517873 2142 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC021451.1-201ENST00000523498 1129 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC005951.2-201ENST00000576282 495 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 MIR5004-201ENST00000579078 107 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 BNIP3P27-201ENST00000599991 412 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AF129408.1-201ENST00000608767 431 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 AC009268.2-201ENST00000621925 457 ntBASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SLIRPQ9GZT3 CR848007.1-201ENST00000442354 1699 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 RNA5SP479-201ENST00000364858 117 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 SNORA23-201ENST00000365128 182 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 MIR627-201ENST00000384979 97 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL109755.1-201ENST00000401791 649 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL356057.3-201ENST00000402607 340 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL356421.1-201ENST00000403255 413 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL136310.1-201ENST00000404926 654 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 MIR1284-201ENST00000408337 120 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 MTATP6P20-201ENST00000414147 562 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC091390.3-201ENST00000426478 338 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC005326.1-201ENST00000429197 123 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 RN7SL542P-201ENST00000467147 294 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 RPL31P41-201ENST00000477967 372 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 GTF2IP9-201ENST00000502460 301 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC022447.3-201ENST00000506865 495 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC023632.4-201ENST00000517783 191 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms