Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC026801.2-201ENST00000515352 425 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC122134.1-202ENST00000569111 1201 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC138915.2-201ENST00000569776 97 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 HMGN2P15-201ENST00000585707 270 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC093838.1-201ENST00000613014 469 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC092608.2-201ENST00000624427 218 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 MIR1291-201ENST00000627649 87 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AP003399.1-201ENST00000637534 361 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 MIR7515-201ENST00000637837 67 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 MTND5P1-201ENST00000445440 1375 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.82□□□□□ -2.12
NKX6-2Q9C056 AC005832.2-201ENST00000538921 1430 ntBASIC1.82□□□□□ -2.12
NKX6-2Q9C056 CCT4P2-201ENST00000233836 1548 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 RNA5SP479-201ENST00000364858 117 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 RPL22P22-201ENST00000395439 379 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL591416.1-201ENST00000404015 867 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 LUZP4P1-201ENST00000415420 344 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC018630.2-202ENST00000422992 927 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 MTATP6P11-201ENST00000428071 670 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 COX6CP12-201ENST00000446748 202 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 RPL39P6-201ENST00000448289 150 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL500527.1-201ENST00000448532 255 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 MRPL42P4-201ENST00000453267 443 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC107626.1-201ENST00000471084 183 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC074250.1-201ENST00000511117 192 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 SAP18P1-201ENST00000512058 390 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 RN7SKP24-201ENST00000515888 284 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 RNA5SP341-201ENST00000516261 117 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 SCARNA15.2-201ENST00000516409 127 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 snoZ278.1-201ENST00000517059 112 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AP001189.2-201ENST00000527320 189 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC022080.3-201ENST00000544433 482 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL391261.3-201ENST00000557194 520 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC087465.1-201ENST00000560574 245 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 CYCSP39-201ENST00000565821 309 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AP001429.1-201ENST00000602568 530 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL354696.1-201ENST00000614652 497 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AC084757.4-201ENST00000616350 526 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 DUXAP9-208ENST00000622815 614 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 AL365361.1-201ENST00000566942 3481 ntBASIC1.81□□□□□ -2.12
NKX6-2Q9C056 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NKX6-2Q9C056 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 MIR34B-201ENST00000385076 84 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 SNORA46.1-201ENST00000391069 153 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL445529.1-201ENST00000398713 389 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL359511.1-201ENST00000402970 211 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 PTGES3P2-201ENST00000407942 482 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 MTATP6P27-201ENST00000416987 621 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 CYCSP32-201ENST00000440548 321 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL049734.2-201ENST00000441066 616 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL135938.1-201ENST00000443141 297 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AC138853.1-201ENST00000503549 823 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 SCARNA17.1-201ENST00000516211 143 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 SCARNA17.2-201ENST00000516334 143 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 RNU6-1282P-201ENST00000516735 96 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AC103783.1-201ENST00000520506 373 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AC125611.1-201ENST00000549563 229 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL020997.2-201ENST00000602607 184 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 SCARNA17.4-201ENST00000614296 143 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL354685.2-201ENST00000448218 1447 ntBASIC1.8□□□□□ -2.12
NKX6-2Q9C056 AL137003.2-201ENST00000606924 2538 ntBASIC1.79□□□□□ -2.12
NKX6-2Q9C056 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.79□□□□□ -2.12
NKX6-2Q9C056 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NKX6-2Q9C056 AL589826.1-201ENST00000340697 249 ntBASIC1.79□□□□□ -2.12
NKX6-2Q9C056 RNU5B-1-201ENST00000363286 116 ntBASIC1.79□□□□□ -2.12
NKX6-2Q9C056 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms