Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC022418.1-201ENST00000624118 445 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC116667.1-201ENST00000604855 2072 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AL672167.1-203ENST00000641299 2975 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 RNU1-94P-201ENST00000362627 173 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 Y_RNA.646-201ENST00000410980 101 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MCFD2P1-201ENST00000417812 300 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 CYCSP10-201ENST00000417973 294 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 RPL21P23-201ENST00000446654 460 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC073587.1-201ENST00000447093 876 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC116533.1-201ENST00000459748 321 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 RNU6-794P-201ENST00000517261 64 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC100770.1-201ENST00000532310 322 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC110588.1-201ENST00000559699 137 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AC020910.3-201ENST00000603701 874 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AL391358.1-201ENST00000605342 190 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 DUSP12P1-201ENST00000612874 516 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MIR6758-201ENST00000620653 63 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MIR7154-201ENST00000620673 73 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 AL669831.3-213ENST00000636676 183 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 MAPK10-263ENST00000641052 4307 ntBASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FOXP3Q9BZS1 GABPAP-201ENST00000419271 1356 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AL049641.1-201ENST00000441055 1948 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC018529.3-201ENST00000624212 2254 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MFSD8-216ENST00000641147 4009 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC126755.2-208ENST00000327792 462 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC138969.1-213ENST00000331436 462 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 Y_RNA.193-201ENST00000363979 102 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RNU6-637P-201ENST00000384050 107 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RNU6-339P-201ENST00000384310 107 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RNA5SP219-201ENST00000390940 113 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MRPL42P3-201ENST00000401492 326 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RN7SKP159-201ENST00000410657 292 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RPS12P5-201ENST00000423449 371 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MTCYBP10-201ENST00000424905 650 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC093106.2-201ENST00000428212 385 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 SNAP23P1-201ENST00000433229 246 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 RPL12P46-201ENST00000436610 195 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC010655.1-201ENST00000449336 292 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC017037.1-201ENST00000508460 471 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC133555.2-201ENST00000550213 292 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC008521.1-201ENST00000587471 187 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 AL445363.3-201ENST00000623080 671 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 KPNA2P1-201ENST00000458289 1591 ntBASIC4.78□□□□□ -1.64
FOXP3Q9BZS1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
FOXP3Q9BZS1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms