Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC007560.1-201ENST00000426912 237 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RPL35AP21-201ENST00000437667 333 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AC073264.2-201ENST00000448886 166 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AC092001.1-201ENST00000453012 261 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 Y_RNA.635-201ENST00000459041 101 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RNA5SP310-201ENST00000459084 116 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RN7SL738P-201ENST00000470264 297 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RNU6-1332P-201ENST00000516666 104 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AP006289.1-201ENST00000538089 277 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 TRAV37-201ENST00000553906 342 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AC138761.3-201ENST00000579993 334 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RN7SL690P-201ENST00000582087 240 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 Y_RNA.387-201ENST00000383918 102 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RNU6-398P-201ENST00000384143 109 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 Y_RNA.535-201ENST00000384612 99 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RNU6-607P-201ENST00000411283 108 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RPS20P14-201ENST00000412545 360 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RPS20P15-201ENST00000412792 311 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC114755.2-201ENST00000413520 361 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 ANP32BP2-201ENST00000454525 545 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RNU7-138P-201ENST00000459479 64 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 RPL21P13-201ENST00000488305 481 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC022493.1-201ENST00000492984 337 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 ENPP7P9-201ENST00000514456 627 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC105031.1-201ENST00000518550 476 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC025755.1-201ENST00000521306 278 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 CASP1P1-201ENST00000526345 212 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC022882.1-201ENST00000532142 501 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 LRRC37A5P-203ENST00000580181 585 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 MIR3672-201ENST00000584290 82 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC090574.1-201ENST00000623186 233 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AL133216.2-202ENST00000634512 349 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 SCARNA15-201ENST00000607520 4325 ntBASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAIPQ9BWF2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC118273.1-201ENST00000525324 3006 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RNA5SP191-201ENST00000362585 102 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RNU6-1303P-201ENST00000364841 107 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 Y_RNA.460-201ENST00000384255 102 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 SNORA70.10-201ENST00000384515 134 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RPS16P5-201ENST00000406501 404 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 U3.32-201ENST00000408116 212 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 OR1H1P-201ENST00000448731 937 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RPS5P7-201ENST00000456664 608 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RN7SL860P-201ENST00000473738 223 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 SCARNA22-201ENST00000503991 125 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 TOMM20P2-201ENST00000540082 421 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 SYF2P1-201ENST00000550658 413 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RN7SL52P-201ENST00000584271 284 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AC023043.2-201ENST00000589678 1026 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AL645944.1-201ENST00000603857 493 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AL355598.1-201ENST00000604169 202 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RN7SL722P-201ENST00000617780 284 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 RN7SL565P-201ENST00000618246 284 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 AP000346.3-201ENST00000622821 210 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 MIR7641-1-201ENST00000627518 61 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 U6.99-201ENST00000637524 83 ntBASIC5.35□□□□□ -1.55
TRAIPQ9BWF2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms