Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CDCA3Q99618 HSPE1P26-201ENST00000405341 275 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 SSXP9-201ENST00000417503 292 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AL645937.1-202ENST00000421799 937 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 THAP5P1-201ENST00000439089 262 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AC112653.1-201ENST00000443851 386 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 FAM103A2P-201ENST00000444122 354 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 RPL36AP33-201ENST00000450395 310 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AC104308.1-201ENST00000454621 333 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 SNORD121B-201ENST00000458838 81 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 snoU13.4-201ENST00000458916 104 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 SETP11-201ENST00000473027 690 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
CDCA3Q99618 Y_RNA.688-201ENST00000516565 95 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 RNU6-528P-201ENST00000516926 100 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AP003497.1-201ENST00000528472 562 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.22□□□□□ -1.89
CDCA3Q99618 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 AL022099.1-201ENST00000604551 712 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 BCRP9-201ENST00000605312 388 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 MIR7844-201ENST00000616161 122 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 AL353748.2-201ENST00000622148 471 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDCA3Q99618 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDCA3Q99618 AC096644.4-201ENST00000563417 2912 ntBASIC3.22□□□□□ -1.89
CDCA3Q99618 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
CDCA3Q99618 RNU6-501P-201ENST00000364072 100 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 RNU6-114P-201ENST00000384704 105 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC090960.1-201ENST00000421072 306 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 Z99497.1-201ENST00000421282 135 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 NUP35P1-201ENST00000422734 947 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.21□□□□□ -1.9
CDCA3Q99618 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDCA3Q99618 AL365184.2-201ENST00000431139 435 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 OR4K11P-201ENST00000431829 904 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 RPL37P21-201ENST00000435890 276 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 MTND1P30-201ENST00000441241 901 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 RPL7P36-201ENST00000444633 681 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 MTATP6P26-201ENST00000445926 662 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.21□□□□□ -1.9
CDCA3Q99618 MRPS31P2-201ENST00000451581 518 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC093278.1-201ENST00000494700 600 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC116347.2-201ENST00000514912 523 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC106038.2-201ENST00000520706 568 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.21□□□□□ -1.9
CDCA3Q99618 MIR4319-201ENST00000577285 85 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 MIR3690-201ENST00000580266 75 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 MIR4435-1-201ENST00000582552 80 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 MIR4307-201ENST00000582802 84 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 AC112187.2-201ENST00000604345 283 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.21□□□□□ -1.9
CDCA3Q99618 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 PLCE1P1-201ENST00000622094 305 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 PABPC1P9-201ENST00000426076 1612 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.9
CDCA3Q99618 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
CDCA3Q99618 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
CDCA3Q99618 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.2□□□□□ -1.9
CDCA3Q99618 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA3Q99618 MTCO1P9-201ENST00000505577 1534 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 Y_RNA.97-201ENST00000363094 102 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 RNU5F-7P-201ENST00000363696 115 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 U8.14-201ENST00000390843 143 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 SKINT1L-201ENST00000401057 817 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 MTCYBP36-201ENST00000404146 440 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 RPS27AP14-201ENST00000422868 454 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.2□□□□□ -1.9
CDCA3Q99618 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 MTCO1P39-201ENST00000426148 480 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.2□□□□□ -1.9
CDCA3Q99618 UBE2V1P13-201ENST00000436983 439 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 RAC1P7-201ENST00000445367 377 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 EPS15P1-201ENST00000448836 336 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 RPS27AP8-201ENST00000452665 445 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC234775.1-201ENST00000454247 670 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.2□□□□□ -1.9
CDCA3Q99618 HIGD1AP13-201ENST00000509878 289 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.2□□□□□ -1.9
CDCA3Q99618 SNRPGP16-201ENST00000533275 226 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms