Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DPPA3P1-201ENST00000448050 469 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 MTND3P24-201ENST00000506306 329 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 CDC42P4-201ENST00000510507 563 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC113155.1-201ENST00000511141 769 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 ARL2BPP2-201ENST00000550907 489 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL138976.2-201ENST00000563989 694 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AP001542.2-201ENST00000593141 364 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC006329.2-201ENST00000611491 394 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL161629.2-201ENST00000615347 275 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 U8.1-201ENST00000362843 134 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 RNU2-68P-201ENST00000410878 191 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 MTCO1P42-201ENST00000457379 726 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL049870.4-201ENST00000555741 486 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 NAP1L1P3-201ENST00000462291 880 ntBASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 AC069528.1-202ENST00000482888 637 ntBASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 SUB1P1-201ENST00000524415 382 ntBASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
CDK5RAP2Q96SN8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 UBE2V1P6-201ENST00000430840 422 ntBASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC090096.1-201ENST00000489168 390 ntBASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CDK5RAP2Q96SN8 AC103710.2-202ENST00000641454 2853 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 RNU6-1249P-201ENST00000363237 111 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 AC073264.1-201ENST00000411508 416 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 RPS3AP9-201ENST00000417027 792 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 MTCYBP45-201ENST00000435243 565 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 ARPC3P1-201ENST00000437218 533 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 RNA5SP310-201ENST00000459084 116 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 SNORD116-30-201ENST00000516468 85 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 NUTF2P8-201ENST00000604593 363 ntBASIC1.9□□□□□ -2.11
CDK5RAP2Q96SN8 RNU6-173P-201ENST00000364215 104 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 RNU6-707P-201ENST00000364647 95 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AL357078.2-201ENST00000416486 427 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AL392003.1-201ENST00000434394 243 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 TPTE2P6-202ENST00000445572 1007 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 HMGN1P8-201ENST00000463578 288 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC108734.3-201ENST00000481241 1165 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AL355812.1-201ENST00000603215 216 ntBASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDK5RAP2Q96SN8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 RNU6-263P-201ENST00000363811 107 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 RPS7P9-201ENST00000414704 586 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 YWHAZP8-201ENST00000436935 731 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 MIR5194-201ENST00000582634 120 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 MIR3616-201ENST00000584070 92 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 U73023.1-201ENST00000603134 700 ntBASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.88□□□□□ -2.11
CDK5RAP2Q96SN8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms