Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 Z82195.2-201ENST00000612348 18351 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 RNU6-198P-201ENST00000384258 104 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MIR196B-201ENST00000384852 84 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MIR34A-201ENST00000385130 110 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MIR514A1-201ENST00000385133 98 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 MIR325-201ENST00000385260 98 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 RNU6-714P-201ENST00000516963 103 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 HMGB1P14-201ENST00000557424 591 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC011451.2-201ENST00000604303 598 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AL158211.4-201ENST00000606988 584 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AC005832.2-201ENST00000538921 1430 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 OR4G2P-202ENST00000641004 1759 ntBASIC2.74□□□□□ -1.97
RPRD1AQ96P16 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
RPRD1AQ96P16 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RNU5E-8P-201ENST00000363502 116 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 SNORD116-12-201ENST00000384468 92 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AL096701.2-201ENST00000416920 238 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 BX119904.4-201ENST00000424402 301 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC002381.1-201ENST00000447049 280 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 SNORD121B-201ENST00000458838 81 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 snoU13.8-201ENST00000458890 104 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 snoU13.28-201ENST00000459235 104 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RN7SL432P-201ENST00000484057 298 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC119751.5-201ENST00000514077 770 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RNU6-1256P-201ENST00000516539 103 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RN7SKP40-201ENST00000517211 242 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AL132857.1-201ENST00000555180 708 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC231657.1-201ENST00000624313 397 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC004808.1-201ENST00000627671 721 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 AC013437.2-201ENST00000639587 677 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.73□□□□□ -1.97
RPRD1AQ96P16 MTCO1P9-201ENST00000505577 1534 ntBASIC2.73□□□□□ -1.97
RPRD1AQ96P16 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 RPL23AP29-201ENST00000397284 453 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AL356057.2-201ENST00000403318 432 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 TIMM9P2-201ENST00000419324 266 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC018630.2-202ENST00000422992 927 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 NANOGP2-201ENST00000435391 727 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 RNF2P1-201ENST00000442955 1010 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 RNU6-420P-201ENST00000458780 107 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 SCARNA15.2-201ENST00000516409 127 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 OR6C7P-201ENST00000547875 934 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC068135.2-201ENST00000569293 1028 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 BBIP1P1-201ENST00000602999 279 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC006023.1-201ENST00000603944 259 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC024560.3-201ENST00000608482 349 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC018645.2-201ENST00000609151 472 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AL603758.1-201ENST00000618654 241 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 CR381653.2-201ENST00000624041 768 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AC131280.1-202ENST00000624067 4211 ntBASIC2.72□□□□□ -1.97
RPRD1AQ96P16 AP000526.1-201ENST00000603308 1388 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms