Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 H3F3AP1-201ENST00000559984 334 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AL158032.1-201ENST00000605401 106 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 MIR3976-201ENST00000606807 139 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC006329.2-201ENST00000611491 394 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AC024255.1-201ENST00000614376 102 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.802-201ENST00000614892 130 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 IGHVIII-44-202ENST00000636235 289 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 DDX10P1-201ENST00000448545 1933 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AOX3P-204ENST00000491025 2107 ntBASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNTNAP3BQ96NU0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.275-201ENST00000364726 110 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 SNORA70.4-201ENST00000365509 134 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 MIR186-201ENST00000384988 86 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 MIR569-201ENST00000385228 96 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RPL21P75-201ENST00000396599 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RPL21P28-201ENST00000401418 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL590556.1-201ENST00000423231 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 EI24P4-201ENST00000423683 1078 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC008264.1-201ENST00000447612 367 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RPL21P11-201ENST00000461458 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC008481.1-201ENST00000463278 396 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RPL21P39-201ENST00000463605 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC132942.1-201ENST00000486753 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC093591.1-201ENST00000491435 481 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RPL21P16-201ENST00000495531 483 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RN7SKP122-201ENST00000515923 296 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP272-201ENST00000516095 111 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 SNORD116-25-201ENST00000516517 92 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC091144.1-201ENST00000519573 138 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 CYCSP26-201ENST00000534107 320 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC007458.1-201ENST00000542812 373 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC027229.1-201ENST00000583887 253 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AC084757.4-201ENST00000616350 526 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL589994.2-201ENST00000621124 579 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 Z99571.1-201ENST00000636677 394 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTNAP3BQ96NU0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC093849.1-201ENST00000563631 2209 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP171-201ENST00000391071 115 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 RNA5SP494-201ENST00000410653 129 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 PTGES3P4-201ENST00000426243 356 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC073063.1-201ENST00000434352 607 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC079168.2-201ENST00000453977 416 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 snoU13.1-201ENST00000459157 104 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC010326.1-201ENST00000462726 602 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 Y_RNA.679-201ENST00000516416 91 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC069113.1-201ENST00000517763 267 ntBASIC5.34□□□□□ -1.55
CNTNAP3BQ96NU0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 6.8 ms