Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RNU6-777P-201ENST00000364265 104 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 MIR320C1-201ENST00000408566 88 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 SSR1P2-201ENST00000415208 787 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 CR769776.1-201ENST00000441254 787 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 FGF7P5-201ENST00000441829 291 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC025750.2-201ENST00000442609 450 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC010099.1-201ENST00000455434 375 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 RNU6-420P-201ENST00000458780 107 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC117522.3-201ENST00000507974 584 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 RNU6-311P-201ENST00000516224 102 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC105185.1-201ENST00000518705 535 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 HMGN1P28-201ENST00000521340 364 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC087465.1-201ENST00000560574 245 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 RPL23AP84-201ENST00000571193 464 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 BNIP3P40-201ENST00000596017 556 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AL391001.1-201ENST00000602747 715 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC013553.2-201ENST00000604244 589 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AL136981.2-201ENST00000617319 734 ntBASIC3.07□□□□□ -1.92
ZNF560Q96MR9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF560Q96MR9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 SNORA80A-201ENST00000363922 136 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 SNORA4.1-201ENST00000364263 144 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 CD24P4-201ENST00000382840 243 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RNU6-157P-201ENST00000383957 107 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RNU6-83P-201ENST00000384568 112 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 MIR634-201ENST00000385208 97 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RN7SKP266-201ENST00000410232 287 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RNU6-757P-201ENST00000410334 100 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC008850.1-201ENST00000427546 362 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 DDX10P1-201ENST00000448545 1933 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AL049874.1-201ENST00000489560 388 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC118282.1-201ENST00000506408 765 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC093809.1-201ENST00000509155 340 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC034159.1-201ENST00000513885 583 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AP000867.2-201ENST00000532468 320 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC124947.2-202ENST00000552735 133 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC013476.2-201ENST00000614456 459 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC010338.1-201ENST00000621823 717 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC010680.1-201ENST00000590024 3590 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
ZNF560Q96MR9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 AC009902.3-201ENST00000606235 2172 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 MIR512-1-201ENST00000384913 84 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ZNF560Q96MR9 U3.20-201ENST00000390909 217 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 RNU6-516P-201ENST00000411381 104 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 PIGPP2-201ENST00000411569 458 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
ZNF560Q96MR9 SPA17P1-201ENST00000416656 452 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms