Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 SEPT2P1-201ENST00000419651 180 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 TAAR7P-201ENST00000436141 242 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AP001486.1-201ENST00000463339 476 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 CYCSP26-201ENST00000534107 320 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 ANP32BP3-201ENST00000559213 706 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC135507.1-201ENST00000607214 561 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AC096586.1-201ENST00000610267 561 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 AL590099.1-201ENST00000615276 138 ntBASIC2.1□□□□□ -2.07
CCDC42Q96M95 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC42Q96M95 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC42Q96M95 SNORA38-201ENST00000363946 132 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC009237.8-201ENST00000445492 379 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 AL929288.2-201ENST00000446368 407 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 PSPHP1-201ENST00000450062 261 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 MTAPP1-201ENST00000489154 819 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC090453.1-201ENST00000495560 436 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AL355877.2-201ENST00000603670 358 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC005332.10-201ENST00000612725 619 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 AC025594.3-201ENST00000613068 790 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 AL162233.1-201ENST00000620014 944 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC42Q96M95 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
CCDC42Q96M95 GDI2P1-201ENST00000429312 1336 ntBASIC2.09□□□□□ -2.08
CCDC42Q96M95 SNORD51.1-201ENST00000365405 77 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 SNORA67.3-201ENST00000384366 140 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 EIF1AXP1-201ENST00000419267 435 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC099548.1-201ENST00000421443 426 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 MTND4P24-201ENST00000424002 397 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 MTCO2P9-201ENST00000503214 694 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 RNU6-1282P-201ENST00000516735 96 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 ARL2BPP5-201ENST00000523141 481 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC106734.1-201ENST00000568646 663 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 BPTFP1-201ENST00000579209 492 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 GAS5-AS1-201ENST00000602767 694 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 OR10AB1P-201ENST00000609613 938 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC093838.1-201ENST00000613014 469 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC090132.2-201ENST00000615881 347 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 AC090772.4-201ENST00000623599 362 ntBASIC2.08□□□□□ -2.08
CCDC42Q96M95 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CCDC42Q96M95 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 SNORA51.6-201ENST00000384151 125 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 RPS3AP24-201ENST00000407896 734 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 RNU6-920P-201ENST00000410926 92 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 TRGVB-201ENST00000453257 471 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 RFC5P1-201ENST00000454419 874 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC097493.1-201ENST00000463958 372 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC096571.1-202ENST00000506634 735 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 HMGN1P28-201ENST00000521340 364 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AC118942.1-201ENST00000529674 1035 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC42Q96M95 AL049838.1-201ENST00000563647 981 ntBASIC2.07□□□□□ -2.08
CCDC42Q96M95 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms