Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC019178.2-201ENST00000423595 505 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC092427.1-202ENST00000430569 476 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 MTND4LP10-201ENST00000435146 291 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 MUPP-201ENST00000438111 566 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 EPS15P1-201ENST00000448836 336 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL109741.2-201ENST00000455561 343 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 ANKRD26P4-201ENST00000455755 950 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL359385.1-201ENST00000456509 365 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC117440.1-201ENST00000474107 571 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AP001025.2-201ENST00000490908 477 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 COX7A2P2-201ENST00000505291 250 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC006390.1-201ENST00000508068 283 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 HSPA8P13-201ENST00000523715 472 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 PSMA2P1-201ENST00000526365 646 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AP003497.1-201ENST00000528472 562 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 UBTFL10-201ENST00000528532 562 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 OR6C7P-201ENST00000547875 934 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC009712.1-201ENST00000564938 316 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 FAM60BP-201ENST00000578364 658 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 MIR5004-201ENST00000579078 107 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 VN1R82P-201ENST00000601481 356 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC006539.2-201ENST00000601729 572 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 RPL23AP92-201ENST00000603609 255 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL596327.1-201ENST00000603629 213 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC068313.1-201ENST00000604028 1008 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC106900.2-201ENST00000604994 317 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 BCRP9-201ENST00000605312 388 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC103710.4-201ENST00000609301 899 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AP002782.1-201ENST00000623107 614 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AP003485.2-201ENST00000623636 610 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC026422.1-201ENST00000623961 452 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL079343.1-201ENST00000572358 1771 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AC011477.1-204ENST00000623416 1325 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 RPL21P132-201ENST00000331267 462 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNU6-1155P-201ENST00000363554 107 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNU6-173P-201ENST00000364215 104 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNA5SP267-201ENST00000364893 126 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNU6-878P-201ENST00000384578 110 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNVU1-14-201ENST00000384770 164 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 MIR7-3-201ENST00000384898 110 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL590084.2-201ENST00000401481 382 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC098592.1-201ENST00000419352 333 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL158156.1-201ENST00000422509 473 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC092447.3-201ENST00000426027 686 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC234781.2-201ENST00000426370 994 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AP000542.1-201ENST00000448473 371 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC104978.1-201ENST00000449387 391 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 MTND2P14-201ENST00000482139 351 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AP002812.1-201ENST00000495378 474 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC114981.1-201ENST00000503897 678 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 CDC42P4-201ENST00000510507 563 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC008716.1-201ENST00000511084 513 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC119751.5-201ENST00000514077 770 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNU6-1095P-201ENST00000516148 108 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 SNORA9.3-201ENST00000516383 129 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 RNU6-714P-201ENST00000516963 103 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 MTATP6P15-201ENST00000527233 835 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 HPRT1P3-201ENST00000539521 576 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 ELOCP32-201ENST00000548625 324 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 SETP7-201ENST00000552169 453 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 MIR4429-201ENST00000580105 73 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 MIR3609-201ENST00000582661 80 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 BBIP1P1-201ENST00000602999 279 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC021171.1-201ENST00000603137 706 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AP000787.2-201ENST00000604432 568 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms