Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AP005264.7-201ENST00000625003 745 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RNA5SP196-201ENST00000625967 102 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 MIR1321-201ENST00000637766 79 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC008013.2-202ENST00000637965 364 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS50Q96JG6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 Y_RNA.89-201ENST00000363031 102 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RNU6-511P-201ENST00000363496 107 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 Y_RNA.295-201ENST00000364918 102 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RNU6-108P-201ENST00000365558 107 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 RNU6-74P-201ENST00000384235 107 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RNU6-837P-201ENST00000391056 108 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RPL21P65-201ENST00000406094 466 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RNA5SP107-201ENST00000411358 122 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RPS7P15-201ENST00000415804 584 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC079780.1-201ENST00000428259 207 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 AL117339.2-201ENST00000430475 180 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 OR4C10P-201ENST00000434991 931 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC234775.1-201ENST00000454247 670 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RPL23AP62-201ENST00000463396 453 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 RPL21P104-201ENST00000464143 478 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 PRDX4P1-201ENST00000507189 574 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC034105.3-201ENST00000565294 442 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 MIR3186-201ENST00000577404 85 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AL121992.2-201ENST00000606262 256 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 AC116096.1-201ENST00000566804 2314 ntBASIC3.89□□□□□ -1.79
VPS50Q96JG6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
VPS50Q96JG6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS50Q96JG6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AP001148.1-201ENST00000624124 2359 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 ZNF680P1-201ENST00000436625 1469 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU6-600P-201ENST00000362524 99 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNA5SP515-201ENST00000364570 118 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU6-867P-201ENST00000364956 107 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU6-754P-201ENST00000391166 107 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU2-36P-201ENST00000410361 191 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RN7SKP159-201ENST00000410657 292 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU2-62P-201ENST00000410868 191 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 UBE2FP1-201ENST00000416536 447 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL137014.1-201ENST00000420490 1226 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC137499.1-201ENST00000427602 88 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL606489.2-201ENST00000433886 234 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC005094.1-201ENST00000440420 368 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 BNIP3P2-201ENST00000441221 577 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 DPPA3P1-201ENST00000448050 469 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 SNRPGP6-201ENST00000451124 220 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 RPL31P58-201ENST00000469001 379 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC078785.3-201ENST00000476607 425 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AF213884.1-201ENST00000488102 463 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RPL7P23-201ENST00000493874 747 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 UBE2CP3-201ENST00000502715 450 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 RNU6-1281P-201ENST00000516223 105 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL121603.1-201ENST00000553815 142 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC022655.2-201ENST00000577280 318 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC053481.4-201ENST00000583164 216 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC007621.1-201ENST00000604544 437 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms