Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AL355836.1-201ENST00000555951 870 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RPL21P12-201ENST00000559810 515 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC012435.1-202ENST00000568772 240 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AL590229.1-201ENST00000603497 542 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AL355596.1-201ENST00000565399 3996 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 Y_RNA.18-201ENST00000362461 102 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 Y_RNA.77-201ENST00000362962 107 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RNA5SP88-201ENST00000365560 109 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 U3.20-201ENST00000390909 217 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RNU6-754P-201ENST00000391166 107 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RPL23AP39-201ENST00000415533 405 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 ATG3P1-201ENST00000419507 911 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 Z99497.1-201ENST00000421282 135 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RPL7P46-201ENST00000425129 740 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC244035.1-201ENST00000430042 390 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AL512844.2-201ENST00000433990 593 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 LARP1BP3-201ENST00000437229 869 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 TRIM60P18-201ENST00000441518 828 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC009961.3-201ENST00000449832 765 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RPS20P20-201ENST00000460498 340 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RPL7P5-201ENST00000471472 736 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RAP1BP2-201ENST00000478270 544 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 SNORA67.7-201ENST00000516664 135 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC106038.2-201ENST00000520706 568 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AP003497.1-201ENST00000528472 562 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC007115.1-201ENST00000546853 234 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AF131215.7-201ENST00000602443 707 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 MTCYBP22-201ENST00000603788 447 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AL591516.1-201ENST00000611326 274 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC084782.3-201ENST00000612282 578 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC090132.2-201ENST00000615881 347 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AL603758.1-201ENST00000618654 241 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC073308.1-201ENST00000623696 305 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC139792.2-201ENST00000624218 587 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC019226.1-201ENST00000625666 515 ntBASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PDLIM5Q96HC4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 Y_RNA.51-201ENST00000362725 102 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RNU6-660P-201ENST00000364566 109 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 SNORA62.3-201ENST00000365110 153 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 MT-TH-201ENST00000387441 69 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RNA5SP44-201ENST00000410446 133 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 MTCO1P17-201ENST00000411522 491 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RPL7P8-201ENST00000411964 730 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
PDLIM5Q96HC4 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms