Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 AC110801.1-201ENST00000623590 212 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 AC079248.2-201ENST00000623779 326 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 AP000553.6-201ENST00000641242 118 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SKA1Q96BD8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
SKA1Q96BD8 ZNF833P-201ENST00000424938 1494 ntBASIC3.66□□□□□ -1.82
SKA1Q96BD8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SKA1Q96BD8 RNU6-1284P-201ENST00000363701 100 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 SNORA9-201ENST00000384215 133 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 RPS20P2-201ENST00000402520 389 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AL359634.1-202ENST00000404721 284 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 RNU2-62P-201ENST00000410868 191 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 RPL7P8-201ENST00000411964 730 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC017079.2-201ENST00000416102 485 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 TRIM60P18-201ENST00000441518 828 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 RNU7-125P-201ENST00000458760 62 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 RPL37P6-201ENST00000460682 294 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 BZW1P2-201ENST00000473537 826 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC005178.1-201ENST00000508392 440 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 RNU6-232P-201ENST00000517144 64 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC007991.1-201ENST00000522680 631 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC103843.2-201ENST00000530523 682 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC011611.1-201ENST00000552179 197 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 NIFKP6-201ENST00000598115 845 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC121334.2-201ENST00000605387 271 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC239868.4-201ENST00000608318 671 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AL360219.1-201ENST00000610230 366 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC009159.1-201ENST00000618386 642 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC091953.5-201ENST00000622919 233 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AL392088.2-201ENST00000637607 285 ntBASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SKA1Q96BD8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SKA1Q96BD8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL445523.1-201ENST00000451184 1362 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SKA1Q96BD8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL049781.1-201ENST00000623195 3585 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RNA5SP42-201ENST00000364278 115 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RNU6-217P-201ENST00000384164 104 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RPL7P25-201ENST00000404151 721 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RNU6-55P-201ENST00000411092 107 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RNU6-954P-201ENST00000411355 107 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 ELOCP17-201ENST00000414751 326 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC099548.1-201ENST00000421443 426 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC006366.1-201ENST00000422002 759 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL158156.1-201ENST00000422509 473 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL353777.1-201ENST00000425552 326 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AP000907.1-201ENST00000428428 510 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL158071.1-201ENST00000430315 461 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 UBE2D3P1-201ENST00000436669 444 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 DDX3P2-201ENST00000446138 111 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC099563.1-201ENST00000456086 418 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 RN7SL601P-201ENST00000471221 293 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 SNORA74D-201ENST00000516404 141 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AP006245.1-201ENST00000522549 120 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC008011.1-201ENST00000545989 227 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.64□□□□□ -1.83
SKA1Q96BD8 AP001981.2-201ENST00000603241 418 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL136363.1-201ENST00000605349 337 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 Z99289.3-201ENST00000605586 594 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AL136313.1-201ENST00000624804 202 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC010149.2-201ENST00000637608 315 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 AC032011.1-201ENST00000611703 1549 ntBASIC3.64□□□□□ -1.83
SKA1Q96BD8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SKA1Q96BD8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SKA1Q96BD8 RNU5F-6P-201ENST00000362979 116 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.63□□□□□ -1.83
SKA1Q96BD8 RNU6-140P-201ENST00000384566 108 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 U3.19-201ENST00000390893 196 ntBASIC3.63□□□□□ -1.83
SKA1Q96BD8 HMGB3P20-201ENST00000417997 600 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 324.5 ms