Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 SNORD62.1-201ENST00000362541 86 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.80-201ENST00000362996 102 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 SNORD3H-201ENST00000384486 214 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 Y_RNA.574-201ENST00000384766 95 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 SNORA11-201ENST00000408789 128 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC080125.1-201ENST00000414888 684 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 USP9YP30-201ENST00000430729 455 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 CYCSP34-201ENST00000458172 304 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AP000942.1-201ENST00000463969 747 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 RPL5P30-201ENST00000465511 891 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC026801.1-201ENST00000497178 464 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 RNU6-635P-201ENST00000516651 102 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC087854.1-201ENST00000519706 414 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 TOMM20P2-201ENST00000540082 421 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AC018889.1-201ENST00000605372 397 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 AL359547.2-201ENST00000615810 418 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 MIR6715B-201ENST00000637172 77 ntBASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTI1AQ96AJ9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 ADAM5-202ENST00000399789 1942 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 RNU6-1059P-201ENST00000363752 98 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 SNORA63.7-201ENST00000365579 123 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 MIR153-1-201ENST00000384914 90 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 Z99755.1-201ENST00000414048 380 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 SSXP9-201ENST00000417503 292 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC243428.1-201ENST00000421099 264 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC104333.2-201ENST00000422630 192 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 OR2AH1P-201ENST00000425717 928 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC093151.1-201ENST00000427711 313 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 BX323845.1-201ENST00000432417 179 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AL591704.1-201ENST00000432574 275 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC245028.2-201ENST00000458673 253 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 SNORD5.1-201ENST00000458800 75 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC010326.1-201ENST00000462726 602 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 RN7SL441P-201ENST00000492388 296 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC026979.1-201ENST00000492525 396 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC110794.1-201ENST00000505816 425 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC022493.2-201ENST00000506122 481 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 RN7SKP60-201ENST00000516985 239 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 RNU6-1271P-201ENST00000517049 105 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 IGKV1-32-201ENST00000519290 311 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 CYCSP27-201ENST00000527643 293 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC023442.1-201ENST00000531247 422 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC025423.5-201ENST00000550230 219 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC026371.1-201ENST00000551867 419 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 ATP5J2P6-201ENST00000565203 266 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC011494.1-201ENST00000596454 237 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC174048.1-201ENST00000603389 144 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 PRR13P7-201ENST00000605538 430 ntBASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTI1AQ96AJ9 AL158163.1-201ENST00000603915 1649 ntBASIC5.59□□□□□ -1.52
VTI1AQ96AJ9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTI1AQ96AJ9 MAPK10-328ENST00000641553 4009 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms