Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.59□□□□□ -1.67
ERCC4Q92889 MIR4775-201ENST00000581168 75 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 MIR4293-201ENST00000584305 78 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AC021646.1-201ENST00000605469 484 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ERCC4Q92889 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.59□□□□□ -1.67
ERCC4Q92889 AC135507.2-201ENST00000612443 309 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 AP001486.3-201ENST00000615334 372 ntBASIC4.59□□□□□ -1.67
ERCC4Q92889 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.59□□□□□ -1.67
ERCC4Q92889 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.59□□□□□ -1.68
ERCC4Q92889 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.58□□□□□ -1.68
ERCC4Q92889 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.58□□□□□ -1.68
ERCC4Q92889 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.58□□□□□ -1.68
ERCC4Q92889 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.58□□□□□ -1.68
ERCC4Q92889 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
ERCC4Q92889 AC126755.2-208ENST00000327792 462 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC138969.1-213ENST00000331436 462 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 SNORD35B-201ENST00000363660 87 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 MT-TC-201ENST00000387405 66 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ERCC4Q92889 RNU6-278P-201ENST00000390945 109 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 RPL32P23-201ENST00000397237 405 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 MIR1250-201ENST00000408098 113 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 RNU2-47P-201ENST00000410649 186 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 RNU6-193P-201ENST00000410977 107 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 MTCYBP8-201ENST00000422855 651 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC005517.2-201ENST00000424673 553 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 COX6B1P7-201ENST00000430845 235 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AL356535.1-201ENST00000440335 398 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC005094.1-201ENST00000440420 368 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 TPT1P12-201ENST00000448968 492 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC010655.1-201ENST00000449336 292 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 RPS23P7-201ENST00000466210 444 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC011276.1-201ENST00000469688 323 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 ST13P14-201ENST00000474095 734 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.58□□□□□ -1.68
ERCC4Q92889 RNA5SP309-201ENST00000516670 106 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 SUMO2P20-201ENST00000520803 283 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.58□□□□□ -1.68
ERCC4Q92889 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.58□□□□□ -1.68
ERCC4Q92889 AL669831.4-202ENST00000590817 238 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC093838.1-201ENST00000613014 469 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC090617.10-201ENST00000624308 134 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC011944.2-201ENST00000624440 683 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC100810.6-201ENST00000638068 285 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ERCC4Q92889 AC116667.1-201ENST00000604855 2072 ntBASIC4.58□□□□□ -1.68
ERCC4Q92889 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ERCC4Q92889 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ERCC4Q92889 MTCO1P24-201ENST00000515438 1558 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ERCC4Q92889 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ERCC4Q92889 FAM35DP-201ENST00000323387 2712 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 NACAP2-201ENST00000318548 624 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RNA5SP322-201ENST00000363617 119 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RN7SKP32-201ENST00000410167 303 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RNU4-25P-201ENST00000410569 230 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 EEF1A1P40-201ENST00000412883 573 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RPS7P15-201ENST00000415804 584 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC017083.1-201ENST00000428093 483 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 ATP5JP1-201ENST00000431631 322 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RPL23AP33-201ENST00000442301 452 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 MRPS17P3-201ENST00000465453 385 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC006512.1-201ENST00000468816 291 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RPL7L1P8-201ENST00000469911 741 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AC135721.1-201ENST00000497954 479 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 NDUFB4P9-201ENST00000511646 388 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 RNU7-51P-201ENST00000516560 62 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RNU6-64P-201ENST00000517119 105 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AC103843.2-201ENST00000530523 682 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AC243972.3-201ENST00000539655 198 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC128657.1-201ENST00000549459 145 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC125611.2-201ENST00000551907 647 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.57□□□□□ -1.68
ERCC4Q92889 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ERCC4Q92889 MIR4795-201ENST00000584182 89 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AP001029.3-201ENST00000588063 596 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.57□□□□□ -1.68
ERCC4Q92889 AC104662.1-201ENST00000604448 511 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 RNA5SP108-201ENST00000605921 117 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms