Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 RNU6-513P-201ENST00000516104 104 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 ZDHHC20P3-201ENST00000531576 336 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AP000787.2-201ENST00000604432 568 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC090517.3-201ENST00000625170 141 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.428-201ENST00000384078 102 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 RNU4-31P-201ENST00000384211 141 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.505-201ENST00000384489 102 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL356806.1-201ENST00000422524 916 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 RPL21P131-201ENST00000497298 483 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 YWHAQP7-201ENST00000603536 658 ntBASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
SYNE2Q8WXH0 MIR153-2-201ENST00000385225 87 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RPL23AP29-201ENST00000397284 453 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AP003467.2-201ENST00000520175 319 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC092650.2-201ENST00000619984 902 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AL442644.1-201ENST00000454390 3105 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 MTCO1P14-201ENST00000441695 1559 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNY4P6-201ENST00000363667 96 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNA5SP363-201ENST00000365072 115 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU6-234P-201ENST00000365229 104 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU6-717P-201ENST00000459076 104 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RPL21P104-201ENST00000464143 478 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU1-92P-201ENST00000517017 135 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 MIR502-201ENST00000606349 86 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 U6atac.1-201ENST00000616025 117 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNA5SP105-201ENST00000391123 113 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 TOMM22P1-201ENST00000418578 312 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RPS15AP6-201ENST00000420703 385 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 HMGB1P47-201ENST00000511281 589 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 OR6C7P-201ENST00000547875 934 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNF6P1-201ENST00000444889 1784 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU6-1128P-201ENST00000362825 109 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RNU6-296P-201ENST00000384608 107 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 HMGB1P13-201ENST00000406019 642 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 MTND6P13-201ENST00000443510 523 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RN7SL274P-201ENST00000492268 272 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 OR9N1P-202ENST00000494289 481 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 RN7SKP179-201ENST00000516126 217 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AL031775.1-201ENST00000607014 887 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC138627.2-201ENST00000624202 601 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AP000776.1-201ENST00000530032 1663 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 MTCO1P7-201ENST00000419523 1542 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 MIR518A2-201ENST00000384966 87 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC009263.1-201ENST00000441193 1239 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AP000889.2-201ENST00000532684 490 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC120053.1-201ENST00000607706 736 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC073569.3-201ENST00000619055 682 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 AC097372.4-201ENST00000625025 466 ntBASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE2Q8WXH0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 Y_RNA.169-201ENST00000363745 96 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 RPL23AP71-201ENST00000470966 469 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 AC026801.1-201ENST00000497178 464 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 AC096745.1-201ENST00000509945 370 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 BNIP3P4-201ENST00000604946 565 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 HMGN2P20-201ENST00000437531 273 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 RPL23AP14-201ENST00000468281 468 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 AC011037.1-201ENST00000483964 558 ntBASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.65□□□□□ -2.3
SYNE2Q8WXH0 VN1R107P-201ENST00000601784 209 ntBASIC0.65□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms