Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC005094.1-201ENST00000440420 368 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 RPL23AP2-201ENST00000471227 466 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 MED28P2-201ENST00000475771 317 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 COX7A2P2-201ENST00000505291 250 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 RNU6-685P-201ENST00000517088 95 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 MIR5188-201ENST00000583467 113 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 MIR4293-201ENST00000584305 78 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 AL591034.3-201ENST00000605511 685 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 SDR42E1P2-201ENST00000614861 481 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 AL138825.1-201ENST00000618587 192 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 SDR42E1P4-201ENST00000620894 481 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 CR381572.2-201ENST00000624852 397 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 MIR4272-201ENST00000635924 64 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 AC004944.1-201ENST00000517807 3059 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM41Q8WV44 ADAM5-202ENST00000399789 1942 ntBASIC8.25□□□□□ -1.09
TRIM41Q8WV44 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC103710.2-202ENST00000641454 2853 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 EXOC5P1-201ENST00000510543 1969 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC008758.3-201ENST00000507003 1829 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 SPRR2C-201ENST00000290702 219 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 RNA5SP391-201ENST00000363456 119 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 RNU6-434P-201ENST00000384376 107 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 Y_RNA.562-201ENST00000384695 113 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 MIR7-3-201ENST00000384898 110 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 RNU6-516P-201ENST00000411381 104 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AL353691.1-201ENST00000451332 387 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC243772.1-201ENST00000451620 410 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC005008.1-201ENST00000456151 612 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AL049839.1-201ENST00000556151 657 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 AC084783.1-201ENST00000565846 910 ntBASIC8.24□□□□□ -1.09
TRIM41Q8WV44 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
TRIM41Q8WV44 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 SNORA23-201ENST00000365128 182 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 Y_RNA.399-201ENST00000383955 105 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 RNU6-842P-201ENST00000384269 107 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 MIR92A2-201ENST00000385299 75 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 PPIAP31-201ENST00000405422 495 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 RPS4XP7-201ENST00000406274 780 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 MTCO3P19-201ENST00000415864 321 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC087884.1-201ENST00000469738 328 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 RNU6-397P-201ENST00000516226 104 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 SNORA81.3-201ENST00000517283 198 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 SETP7-201ENST00000552169 453 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC109446.1-201ENST00000566172 220 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC025588.3-201ENST00000604182 274 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC010201.1-201ENST00000605051 540 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 SCARNA15.3-201ENST00000626315 122 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 SCARNA4.1-201ENST00000628597 123 ntBASIC8.23□□□□□ -1.09
TRIM41Q8WV44 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC8.23□□□□□ -1.09
TRIM41Q8WV44 AC092376.2-201ENST00000622621 4116 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 Y_RNA.19-201ENST00000362462 99 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 SNORD27-201ENST00000363981 72 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 Y_RNA.270-201ENST00000364693 104 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 RNU6-715P-201ENST00000365204 103 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 Y_RNA.478-201ENST00000384358 107 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 MIR218-2-201ENST00000385006 110 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AC097374.1-203ENST00000400783 485 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AC104332.1-201ENST00000440471 797 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 CHEK2P4-201ENST00000450340 246 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 OR2AQ1P-201ENST00000451972 200 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 OARD1-209ENST00000471367 401 ntTSL 2 BASIC8.22□□□□□ -1.09
TRIM41Q8WV44 AP001086.1-201ENST00000494882 321 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 ENPP7P9-201ENST00000514456 627 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 SNORA25.11-201ENST00000515935 105 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 RNU2-69P-201ENST00000516061 100 ntBASIC8.22□□□□□ -1.09
TRIM41Q8WV44 RNU1-103P-201ENST00000516502 125 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms