Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC011978.2-201ENST00000569835 2054 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 MIR337-201ENST00000362281 93 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 snoZ40.1-201ENST00000364540 72 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 RNU6-298P-201ENST00000390888 96 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 RNU2-21P-201ENST00000410368 188 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AL356320.2-201ENST00000417263 507 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 ELOCP6-201ENST00000429066 328 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC093155.1-201ENST00000440164 826 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 USP9YP25-201ENST00000457708 443 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 ELOCP12-201ENST00000458706 328 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC096992.1-201ENST00000459808 709 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC073901.1-201ENST00000462471 408 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC104689.1-201ENST00000473356 768 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 GZMAP1-201ENST00000503054 631 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC114322.1-201ENST00000506771 926 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 MTCYBP16-201ENST00000509187 1129 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC104986.1-201ENST00000517978 436 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 ZNF192P1-203ENST00000565888 810 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC074051.3-201ENST00000570238 358 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AP001269.3-201ENST00000588718 329 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC091946.2-201ENST00000606105 291 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC013470.4-201ENST00000619978 986 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AC006065.5-201ENST00000623427 349 ntBASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHROOM3Q8TF72 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 MIR16-1-201ENST00000385271 89 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 RNU2-28P-201ENST00000410457 189 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AL136133.1-201ENST00000413694 376 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 NUP35P2-201ENST00000416748 943 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 USP9YP27-201ENST00000418455 438 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 MTCO3P1-205ENST00000422088 832 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC005517.2-201ENST00000424673 553 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC092648.1-201ENST00000425870 423 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 RPL36P19-201ENST00000430744 301 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 EXOSC3P1-201ENST00000448649 500 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 NF1P3-201ENST00000457709 450 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC013828.1-201ENST00000481845 158 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 OR5H4P-201ENST00000510851 923 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC110760.3-202ENST00000515177 371 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP135-201ENST00000517019 125 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 SNORA31.26-201ENST00000517250 137 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 MTND2P32-201ENST00000521584 1038 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 HIGD1AP6-201ENST00000521833 279 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 DEFB130C-202ENST00000530001 230 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AP004242.1-201ENST00000533701 349 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 GAS5-AS1-201ENST00000602767 694 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC105429.2-201ENST00000610567 517 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 U6.101-201ENST00000637707 76 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 FAM157B-203ENST00000639350 358 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 MTND4P13-201ENST00000402078 1023 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 NAP1L1P3-201ENST00000462291 880 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC079203.1-201ENST00000487972 404 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC090071.1-201ENST00000507713 644 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AP003385.6-201ENST00000531603 374 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC125611.1-201ENST00000549563 229 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC103810.1-201ENST00000579873 453 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 MIR4760-201ENST00000585040 80 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AL138478.1-201ENST00000612252 832 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AL512506.2-201ENST00000624472 458 ntBASIC2.16□□□□□ -2.06
SHROOM3Q8TF72 AC099786.3-201ENST00000565735 1410 ntBASIC2.15□□□□□ -2.06
SHROOM3Q8TF72 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHROOM3Q8TF72 DBF4P1-201ENST00000412976 1892 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 PAICSP7-201ENST00000419829 962 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AC104332.2-201ENST00000429959 156 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 NEK4P1-201ENST00000433383 879 ntBASIC2.15□□□□□ -2.07
SHROOM3Q8TF72 AL138799.3-201ENST00000438968 350 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms