Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.22□□□□□ -2.05
LINC01560Q8TB33 AC099786.3-201ENST00000565735 1410 ntBASIC2.22□□□□□ -2.05
LINC01560Q8TB33 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
LINC01560Q8TB33 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01560Q8TB33 MAPK10-322ENST00000641485 4530 ntBASIC2.21□□□□□ -2.05
LINC01560Q8TB33 AC005539.1-201ENST00000443768 1479 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 RNA5SP432-201ENST00000362480 116 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 ELOCP9-201ENST00000418624 239 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 BX119904.4-201ENST00000424402 301 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 HMGN2P20-201ENST00000437531 273 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 COX7BP2-201ENST00000437976 242 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 RPL26P6-201ENST00000440913 438 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 EEF1E1P1-201ENST00000446998 430 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 MTND1P31-201ENST00000449206 961 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 DUXAP8-207ENST00000456786 622 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 RPL30P9-201ENST00000465586 330 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 HMGN2P13-201ENST00000476476 274 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 HMGB1P36-201ENST00000487709 576 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC108729.1-201ENST00000487812 947 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 RNU6-528P-201ENST00000516926 100 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 ERHP1-201ENST00000523006 310 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 OR6C7P-201ENST00000547875 934 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AL163153.1-201ENST00000554223 283 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 BBIP1P1-201ENST00000602999 279 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AL133507.1-201ENST00000605269 557 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC245297.2-201ENST00000610119 565 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 DUXAP10-204ENST00000612052 616 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AL450472.3-201ENST00000615578 367 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 AP000776.1-201ENST00000530032 1663 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
LINC01560Q8TB33 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01560Q8TB33 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 MTCYBP38-201ENST00000417160 1123 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 ZYG11AP1-201ENST00000430329 837 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 THAP5P1-201ENST00000439089 262 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 FGF7P5-201ENST00000441829 291 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC010587.2-201ENST00000511727 448 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 RNU6-714P-201ENST00000516963 103 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC090695.1-201ENST00000561269 1222 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC022662.1-201ENST00000580252 331 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC009220.3-201ENST00000604318 586 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC144521.1-201ENST00000607148 956 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC002076.2-201ENST00000617362 122 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC002550.2-201ENST00000621246 394 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AL078595.3-201ENST00000623815 1166 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
LINC01560Q8TB33 MTND5P7-201ENST00000413558 1798 ntBASIC2.2□□□□□ -2.06
LINC01560Q8TB33 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01560Q8TB33 AC011477.1-204ENST00000623416 1325 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 AC090740.1-201ENST00000623193 2262 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 RNU6-777P-201ENST00000364265 104 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 MIR518C-201ENST00000384822 101 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 RNA5SP210-201ENST00000391034 120 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 RNU6-1077P-201ENST00000410506 102 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 RNA5SP38-201ENST00000410750 119 ntBASIC2.19□□□□□ -2.06
LINC01560Q8TB33 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC01560Q8TB33 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC01560Q8TB33 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms