Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 RNU6-657P-201ENST00000383904 107 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 U6.112-201ENST00000384129 70 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 MIR196B-201ENST00000384852 84 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 MIR27B-201ENST00000385129 97 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 RPS3AP24-201ENST00000407896 734 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 FCF1P1-201ENST00000432690 571 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 PGBD4P3-201ENST00000440731 581 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 ANKRD26P4-201ENST00000455755 950 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AP001486.1-201ENST00000463339 476 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AL049873.1-201ENST00000480540 376 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC022634.1-201ENST00000520765 532 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC118942.1-201ENST00000529674 1035 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC087465.1-201ENST00000560574 245 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 ISCA1P3-201ENST00000577104 373 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 VN1R74P-201ENST00000613259 503 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 DDX10P1-201ENST00000448545 1933 ntBASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
CLHC1Q8NHS4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 HMGB1P5-201ENST00000255320 642 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MIR518C-201ENST00000384822 101 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MTCO3P1-205ENST00000422088 832 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MTCYBP32-201ENST00000427945 1084 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 USP12PX-201ENST00000432383 1057 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MTND4P15-201ENST00000437913 1033 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 BTBD7P2-201ENST00000441962 620 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 SNORA59A-201ENST00000459326 152 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 HSPE1P6-201ENST00000479457 291 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC013828.1-201ENST00000481845 158 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC096576.1-201ENST00000489014 359 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC114786.4-201ENST00000508771 728 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC112673.1-201ENST00000513168 575 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC114797.1-201ENST00000514003 728 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC027338.1-201ENST00000514840 825 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AP002748.2-201ENST00000528671 348 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 SNORD14A-201ENST00000606526 91 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC093875.1-201ENST00000623688 504 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 MTND4P27-201ENST00000450813 1354 ntBASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CLHC1Q8NHS4 AC007785.2-201ENST00000598627 1916 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC062016.1-201ENST00000355719 319 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 RNU6-492P-201ENST00000363035 104 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 RNU6-1066P-201ENST00000363573 105 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 RNU2-28P-201ENST00000410457 189 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 LUZP4P1-201ENST00000415420 344 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC019097.1-201ENST00000424783 735 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AC063976.3-201ENST00000426849 329 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 AL049734.2-201ENST00000441066 616 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 SUMO2P2-201ENST00000456482 255 ntBASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLHC1Q8NHS4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms