Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-751P-201ENST00000516382 101 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 RNA5SP281-201ENST00000516504 135 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AC022784.5-201ENST00000522241 437 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AMZ2P1-203ENST00000565833 850 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 RPS3AP23-202ENST00000574601 686 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AL158827.2-201ENST00000602494 330 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 AL691447.3-201ENST00000635020 330 ntBASIC2.28□□□□□ -2.04
CCDC112Q8NEF3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.05
CCDC112Q8NEF3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 RNU1-105P-201ENST00000363470 161 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 BTF3P7-201ENST00000407097 488 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 RNU4-72P-201ENST00000410754 173 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL513331.1-201ENST00000411908 397 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC234781.2-201ENST00000426370 994 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 CBWD4P-201ENST00000445695 655 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL929288.2-201ENST00000446368 407 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC092436.1-201ENST00000506450 503 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 RNU6-27P-201ENST00000516146 107 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 RNU6-928P-201ENST00000516876 104 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 COX6CP5-201ENST00000527162 228 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 RPS15AP11-201ENST00000594193 385 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL450270.1-201ENST00000606160 391 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AP002826.1-201ENST00000608835 315 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC112Q8NEF3 AL022578.1-201ENST00000439330 1433 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 MIR767-201ENST00000390228 109 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AL714022.1-201ENST00000439897 151 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 IPO7P1-201ENST00000442031 636 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 COX6CP12-201ENST00000446748 202 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC092798.1-201ENST00000458542 409 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC087588.1-201ENST00000462203 316 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC108729.2-201ENST00000476543 840 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC116337.2-201ENST00000477662 156 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC008837.1-201ENST00000511513 412 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 KATNBL1P1-201ENST00000605192 748 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AP005137.2-201ENST00000609238 400 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 AC079395.3-201ENST00000615161 484 ntBASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC112Q8NEF3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC006020.1-201ENST00000420179 1854 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AL359851.1-201ENST00000569460 4997 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 MIR525-201ENST00000384978 85 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 RPL31P54-201ENST00000429803 370 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC092170.1-201ENST00000440211 356 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC096638.1-201ENST00000444678 216 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 MTCYBP17-201ENST00000503579 789 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC147055.4-201ENST00000504399 745 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 RNU6-798P-201ENST00000516912 103 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AP001317.1-201ENST00000531194 960 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC026464.5-201ENST00000562497 722 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AGGF1P5-201ENST00000567900 919 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC068135.2-201ENST00000569293 1028 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 SNORD39.3-201ENST00000584451 71 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC009318.4-201ENST00000620496 486 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AL031601.2-202ENST00000622650 282 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC112Q8NEF3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms