Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 DEFB108F-201ENST00000344638 222 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RNA5SP124-201ENST00000362739 110 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RPS20P2-201ENST00000402520 389 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 MTCYBP36-201ENST00000404146 440 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RNU6ATAC-201ENST00000408749 126 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RNU6-516P-201ENST00000411381 104 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RPL7P8-201ENST00000411964 730 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 RPL39P40-201ENST00000445481 146 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 BET1P1-201ENST00000482276 359 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC116347.2-201ENST00000514912 523 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 OR5B10P-201ENST00000532869 642 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC092354.1-201ENST00000606057 376 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC112204.3-201ENST00000623822 332 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC019226.1-201ENST00000625666 515 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC63Q8NA47 OR8B1P-202ENST00000641132 1178 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 OR1S2-201ENST00000302592 978 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 RNU6-809P-201ENST00000384461 107 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 MIR493-201ENST00000385254 89 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC110754.1-201ENST00000399740 601 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 RPL7P25-201ENST00000404151 721 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AL049734.2-201ENST00000441066 616 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC118469.1-201ENST00000442943 488 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 H2AFZP6-201ENST00000444403 394 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 GSTA11P-201ENST00000452866 669 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AL359385.1-201ENST00000456509 365 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 RNA5SP310-201ENST00000459084 116 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AP001804.3-201ENST00000525146 880 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC005951.2-201ENST00000576282 495 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 MTCO3P13-201ENST00000577757 781 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AL391813.2-201ENST00000609113 322 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC078883.4-201ENST00000623218 367 ntBASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC63Q8NA47 AC005832.2-201ENST00000538921 1430 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 ZNF833P-201ENST00000424938 1494 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RPS29P4-201ENST00000414733 161 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 SYF2P2-201ENST00000417620 583 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AC122718.1-201ENST00000439448 744 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RPS27AP8-201ENST00000452665 445 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AL590639.1-201ENST00000456484 337 ntBASIC3.11□□□□□ -1.91
CCDC63Q8NA47 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC63Q8NA47 RPL7P15-201ENST00000461190 712 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms