Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC005832.2-201ENST00000538921 1430 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 RNU4-72P-201ENST00000410754 173 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC107081.1-201ENST00000414975 361 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 PPP1R11P2-201ENST00000423543 382 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 HSPD1P21-201ENST00000436541 245 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 NDUFB4P6-201ENST00000436819 366 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 HSPE1P6-201ENST00000479457 291 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC106872.3-201ENST00000495104 446 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 RAC1P5-201ENST00000512182 576 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 RNU6-232P-201ENST00000517144 64 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AP004247.1-201ENST00000531556 1289 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 CCNG2P1-201ENST00000549521 1000 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 MRPS36P5-201ENST00000551909 298 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 MIR544B-201ENST00000582372 78 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC006504.3-201ENST00000586818 523 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC083760.1-201ENST00000589621 670 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 VN1R85P-201ENST00000601587 426 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 HSPE1P7-201ENST00000604681 321 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC024941.1-201ENST00000612250 334 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC097655.1-201ENST00000635075 318 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.54□□□□□ -2
CCDC71LQ8N9Z2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RNU6-637P-201ENST00000384050 107 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 SNORD15B-201ENST00000384714 146 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 MIR325-201ENST00000385260 98 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RNU6-1197P-201ENST00000391183 107 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL357075.1-201ENST00000404107 726 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RN7SKP266-201ENST00000410232 287 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL445669.1-201ENST00000426743 755 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RPL39P40-201ENST00000445481 146 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 MTND2P24-201ENST00000453434 806 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RPF2P2-201ENST00000504693 896 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC021678.1-201ENST00000505195 936 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC011260.1-201ENST00000578420 472 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC004223.4-201ENST00000612426 332 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC122133.1-201ENST00000613964 233 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AF246928.1-201ENST00000623768 87 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC079248.2-201ENST00000623779 326 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 PCMTD1P7-201ENST00000634506 357 ntBASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC71LQ8N9Z2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
CCDC71LQ8N9Z2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
CCDC71LQ8N9Z2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 AC008568.2-201ENST00000623862 2313 ntBASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 RNA5SP50-201ENST00000363731 107 ntBASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC71LQ8N9Z2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms